RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RASGRP3Q8IV61 690 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 HOXB13Q92826 284 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SMCO4Q9NRQ5 59 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF41P51814 821 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLC39A12Q504Y0 691 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MBOAT1Q6ZNC8 495 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PLEKHH3Q7Z736 793 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 OR2M4Q96R27 311 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 NRCAMQ92823 1304 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF705FA8MVS1 300 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF705DP0CH99 300 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF705BP0CI00 300 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PEX2P28328 305 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CTNNB1P35222 781 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 C1QTNF8P60827 252 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLC36A3Q495N2 470 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZSWIM9Q86XI8 627 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PHF13Q86YI8 300 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZMIZ2Q8NF64 920 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ADAD1Q96M93 576 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CLCA3PQ9Y6N3 262 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 E5RJQ4 531 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PROM1O43490 865 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 BTG3Q14201 252 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SGCBQ16585 318 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 EGFL6Q8IUX8 553 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LIX1Q8N485 282 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DAZAP1Q96EP5 407 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 FAXDC2Q96IV6 333 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MAF1Q9H063 256 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PCDHGA5Q9Y5G8 931 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CRYZL1O95825 349 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 BATFQ16520 125 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GPR151Q8TDV0 419 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DPF1Q92782 380 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TNFRSF25Q93038 417 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 RGMAQ96B86 450 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM246Q9BRR3 403 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MROQ9BYG7 248 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LGALS13Q9UHV8 139 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CXCL8P10145 99 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GABARAPL2P60520 117 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SERINC3Q13530 473 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GK2Q14410 553 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CHRNA6Q15825 494 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DECR1Q16698 335 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SCIMPQ6UWF3 145 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 C6orf120Q7Z4R8 191 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 NEIL3Q8TAT5 605 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM234Q8WY98 164 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PEX13Q92968 403 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MRM3Q9HC36 420 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DERAQ9Y315 318 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 INMT-MINDY4F8WBC2 141 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 AURKAO14965 403 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GNRHRP30968 328 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MON1AQ86VX9 555 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLC7A13Q8TCU3 470 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 IMP3Q9NV31 184 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GRHPRQ9UBQ7 328 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 RIMKLBQ9ULI2 386 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TUBAL3A6NHL2 446 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ZMPSTE24O75844 475 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ERVK-16P61578 105 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 DEFB106AQ8N104 65 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MARVELD2Q8N4S9 558 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF75AQ96N20 296 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 NMUR2Q9GZQ4 415 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 PCDHGA2Q9Y5H1 932 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MUSKO15146 869 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 TSSK3Q96PN8 268 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 TFB2MQ9H5Q4 396 aaKnown RBP8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF16P17020 682 aaPredicted RBP8.59□□□□□ -1.03
SYNE3-205ENST00000557275 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MAB21L3Q8N8X9 362 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ADAMTS10Q9H324 1103 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 TDP1Q9NUW8 608 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 HSPE1-MOB4S4R3N1 261 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 YBEYP58557 167 aaPredicted RBP8.59□□□□□ -1.03
SYNE3-205ENST00000557275 OR10G2Q8NGC3 310 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 SLC2A11Q9BYW1 496 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 CLEC3AO75596 197 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 IRF2P14316 349 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 KCNC4Q03721 635 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MPP7Q5T2T1 576 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 IL23RQ5VWK5 629 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 GDPD1Q8N9F7 314 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM125Q96AQ2 219 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 MGAT4CQ9UBM8 478 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 ST14Q9Y5Y6 855 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 CBSLP0DN79 551 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 CBSP35520 551 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 SLC39A4Q6P5W5 647 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 EFCAB11Q9BUY7 163 aa8.59□□□□□ -1.03
SYNE3-205ENST00000557275 FER1L4A9Z1Z3 1794 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms