RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 C5AR2Q9P296 337 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 TRPC4Q9UBN4 977 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 CDC14AQ9UNH5 594 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 MTO1Q9Y2Z2 717 aaKnown RBP9.8□□□□□ -0.84
SHMT2-224ENST00000556737 MAP4K5Q9Y4K4 846 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 OARD1Q9Y530 152 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 CPAMD8Q8IZJ3 1885 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 DOCK10Q96BY6 2186 aa9.8□□□□□ -0.84
SHMT2-224ENST00000556737 CLEC18AA5D8T8 446 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 IDSB3KWA1 339 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 TXNDC9O14530 226 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 RIPK2O43353 540 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 DPM1O60762 260 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 NSA2O95478 260 aaKnown RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 GSTA2P09210 222 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 COX6A1P12074 109 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ACPPP15309 386 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 IL1RNP18510 177 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 GP5P40197 560 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 SLC6A12P48065 614 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CDKL1Q00532 357 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 REEP5Q00765 189 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MEF2AQ02078 507 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 OCA2Q04671 838 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 AIMP2Q13155 320 aaKnown RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 EFTUD2Q15029 972 aaKnown RBP eCLIP9.79□□□□□ -0.848e-9■■■■■ 30.8
SHMT2-224ENST00000556737 TSNQ15631 228 aaKnown RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CATSPEREQ5SY80 951 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ATG9BQ674R7 924 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 IGFL3Q6UXB1 125 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CLEC18BQ6UXF7 455 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CYS1Q717R9 158 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ASPGQ86U10 573 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 PDSS2Q86YH6 399 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 KLHDC8AQ8IYD2 350 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MREGQ8N565 214 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MFSD9Q8NBP5 474 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 KCT2Q8NC54 265 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CLEC18CQ8NCF0 446 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ZNF740Q8NDX6 193 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ATL1Q8WXF7 558 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 C8orf44Q96CB5 159 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MOCOSQ96EN8 888 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CPNE1Q99829 537 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 CCDC77Q9BR77 488 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 MKKSQ9NPJ1 570 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 ATP13A2Q9NQ11 1180 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 LUZP4Q9P127 313 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 C3orf18Q9UK00 162 aa9.79□□□□□ -0.84
SHMT2-224ENST00000556737 G3BP2Q9UN86 482 aaKnown RBP9.79□□□□□ -0.84
SHMT2-224ENST00000556737 A0A087WUV0 522 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 LOC102723996A0A087X1L8 192 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 IGHV1-45A0A0A0MS14 117 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 TRBC2A0A5B9 178 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 SMIM23A6NLE4 172 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 H0YIG0 161 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 MAP2K7O14733 419 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 PHGDHO43175 533 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 JRKO75564 520 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 BMP10O95393 424 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 HPP00738 406 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ANXA5P08758 320 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ITGA3P26006 1051 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 GMPRP36959 345 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 CCR8P51685 355 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 POU4F1Q01851 419 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ILF2Q12905 390 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 NDUFA9Q16795 377 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 C18orf21Q32NC0 220 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 KBTBD12Q3ZCT8 623 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 UBAP2Q5T6F2 1119 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 IGFL2Q6UWQ7 119 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ADAMTSL2Q86TH1 951 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 THOC6Q86W42 341 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 AFAP1L2Q8N4X5 818 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 CAMKVQ8NCB2 501 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ZCCHC10Q8TBK6 192 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 SLC5A11Q8WWX8 675 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 PNPLA2Q96AD5 504 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 MRRFQ96E11 262 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 TSNARE1Q96NA8 513 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 TMEM79Q9BSE2 394 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 TRIM54Q9BYV2 358 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 UNKQ9C0B0 810 aaKnown RBP9.78□□□□□ -0.84
SHMT2-224ENST00000556737 DERL2Q9GZP9 239 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 CENPHQ9H3R5 247 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 PELI2Q9HAT8 420 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 ZNF160Q9HCG1 818 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 LRRC4CQ9HCJ2 640 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 GPAMQ9HCL2 828 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 HCN3Q9P1Z3 774 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 CTNNAL1Q9UBT7 734 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 CSAG2Q9Y5P2 127 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 NBASA2RRP1 2371 aa9.78□□□□□ -0.84
SHMT2-224ENST00000556737 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
SHMT2-224ENST00000556737 PABPN1LA6NDY0 278 aaKnown RBP9.77□□□□□ -0.85
SHMT2-224ENST00000556737 GOLGA6L10A6NI86 522 aa9.77□□□□□ -0.85
SHMT2-224ENST00000556737 C4orf51C9J302 202 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms