RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SLCO4A1Q96BD0 722 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 MED8Q96G25 268 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 ITCHQ96J02 903 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 SLC45A3Q96JT2 553 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 OR52E6Q96RD3 313 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 NR1H4Q96RI1 486 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-235ENST00000556082 KCTD14Q9BQ13 255 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-235ENST00000556082 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 NT5DC2Q9H857 520 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 RMND5AQ9H871 391 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 SGK2Q9HBY8 427 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 SERHLQ9NQF3 203 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 CCDC177Q9NQR7 707 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-235ENST00000556082 C8orf4Q9NR00 106 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 SLAMF8Q9P0V8 285 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 FAM8A1Q9UBU6 413 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 NCKAP1Q9Y2A7 1128 aa7.99□□□□□ -1.13
ATXN3-235ENST00000556082 WBP11Q9Y2W2 641 aaKnown RBP7.99□□□□□ -1.13
ATXN3-235ENST00000556082 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TCRBV5S2A0A599 114 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 KRT87PA6NCN2 255 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CCDC85CA6NKD9 419 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TOR1BO14657 336 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ARPC2O15144 300 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 DENRO43583 198 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 WISP1O95388 367 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 KLF8O95600 359 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CEACAM5P06731 702 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 RPSAP08865 295 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PIM1P11309 404 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 FCGR1AP12314 374 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 HOXB9P17482 250 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ATP6V1B2P21281 511 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 IL10P22301 178 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CXCR2P25025 360 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PEX2P28328 305 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 SERPINB1P30740 379 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 HSPA13P48723 471 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ERFP50548 548 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CLCNKAP51800 687 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 KIAA1024LP59773 190 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PHC1P78364 1004 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ACSM2AQ08AH3 577 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 MAP7Q14244 749 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PYCR3Q53H96 274 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 RABL3Q5HYI8 236 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 HABP4Q5JVS0 413 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 EOGTQ5NDL2 527 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 LPCAT4Q643R3 524 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ACSM2BQ68CK6 577 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 FKBP9P1Q75LS8 142 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CAMKMTQ7Z624 323 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TRIM69Q86WT6 500 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 KRTCAP2Q8N6L1 136 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TRPV3Q8NET8 790 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ABHD11Q8NFV4 315 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 OR14C36Q8NHC7 312 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 GANCQ8TET4 914 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 SMPDL3AQ92484 453 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 COQ8BQ96D53 544 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 CXorf40BQ96DE9 158 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 APOLD1Q96LR9 279 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF583Q96ND8 569 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PKP2Q99959 881 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 MENTQ9BUN1 341 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 APOOQ9BUR5 198 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PAIP1Q9H074 479 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 RHBGQ9H310 441 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TRIT1Q9H3H1 467 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 MVB12BQ9H7P6 319 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 GORASP2Q9H8Y8 452 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PELI2Q9HAT8 420 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 WASH6PQ9NQA3 447 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 GEMIN8Q9NWZ8 242 aaKnown RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 MAGEL2Q9UJ55 1249 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 ASF1AQ9Y294 204 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 HIF3AQ9Y2N7 669 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 NEUROG3Q9Y4Z2 214 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PCYT1BQ9Y5K3 369 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-235ENST00000556082 PIAS3Q9Y6X2 628 aa7.98□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3KA0A087X1G2 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 DHRS12A0PJE2 317 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 PIPSLA2A3N6 862 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 MEGF11A6BM72 1044 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3FA6NER0 549 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 MAGEB17A8MXT2 336 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 CACNB4O00305 520 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SCN2BO60939 215 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 FUCA1P04066 466 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 SLC35G4P0C7Q5 338 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 ZCCHC18P0CG32 403 aa7.97□□□□□ -1.13
ATXN3-235ENST00000556082 UQCRBP14927 111 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms