RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 TRIM54Q9BYV2 358 aa10.87□□□□□ -0.67
LRP1-209ENST00000555941 COPG2Q9UBF2 871 aa10.87□□□□□ -0.67
LRP1-209ENST00000555941 SUCOQ9UBS9 1254 aaKnown RBP10.87□□□□□ -0.67
LRP1-209ENST00000555941 SEC14L3Q9UDX4 400 aa10.87□□□□□ -0.67
LRP1-209ENST00000555941 ABCA12Q86UK0 2595 aa10.87□□□□□ -0.67
LRP1-209ENST00000555941 CROCCQ5TZA2 2017 aa10.87□□□□□ -0.67
LRP1-209ENST00000555941 PABPN1LA6NDY0 278 aaKnown RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 CES2O00748 559 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 SEC24DO94855 1032 aaPredicted RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 MLYCDO95822 493 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CELA2AP08217 269 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 NPPBP16860 134 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 EFNA3P52797 238 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 AP1S2P56377 157 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 IL2P60568 153 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CRYMQ14894 314 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 HERC3Q15034 1050 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 BTBD16Q32M84 506 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 SPANXN3Q5MJ09 141 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 ACER2Q5QJU3 275 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 RNASEH2BQ5TBB1 312 aaKnown RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 DUPD1Q68J44 220 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CAPN13Q6MZZ7 669 aaPredicted RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 MYO7BQ6PIF6 2116 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 ANKRD37Q7Z713 158 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 STRA8Q7Z7C7 330 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CNTN4Q8IWV2 1026 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 LGI4Q8N135 537 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 AGGF1Q8N302 714 aaeCLIP10.86□□□□□ -0.67
LRP1-209ENST00000555941 MFSD9Q8NBP5 474 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 ABHD11Q8NFV4 315 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 OR4K1Q8NGD4 311 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 ATL1Q8WXF7 558 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 MS4A14Q96JA4 679 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CLK4Q9HAZ1 481 aaKnown RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 MMP25Q9NPA2 562 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 IARS2Q9NSE4 1012 aaKnown RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 ADAMTS6Q9UKP5 1117 aa10.86□□□□□ -0.67
LRP1-209ENST00000555941 CORO1CQ9ULV4 474 aaPredicted RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 KLF2Q9Y5W3 355 aaPredicted RBP10.86□□□□□ -0.67
LRP1-209ENST00000555941 A8MUI8 341 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 MAGEB17A8MXT2 336 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 SGK494L7N484 410 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 UNC5CO95185 931 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 IL1RNP18510 177 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 CCR8P51685 355 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 CASP6P55212 293 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 KCNK10P57789 538 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.67
LRP1-209ENST00000555941 MEF2AQ02078 507 aaPredicted RBP10.85□□□□□ -0.67
LRP1-209ENST00000555941 DHX9Q08211 1270 aaKnown RBP10.85□□□□□ -0.67
LRP1-209ENST00000555941 NAE1Q13564 534 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 PWP1Q13610 501 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 PPP1R7Q15435 360 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 NSDHLQ15738 373 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 MEP1AQ16819 746 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 KCTD19Q17RG1 926 aaPredicted RBP10.85□□□□□ -0.67
LRP1-209ENST00000555941 KRTCAP3Q53RY4 240 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 ZNF766Q5HY98 468 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 SP5Q6BEB4 398 aaPredicted RBP10.85□□□□□ -0.67
LRP1-209ENST00000555941 PAQR3Q6TCH7 311 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 RPTNQ6XPR3 784 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 LANCL3Q6ZV70 420 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 PRSS41Q7RTY9 318 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 SLC26A11Q86WA9 606 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 AFAP1L2Q8N4X5 818 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 HORMAD2Q8N7B1 307 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 KCT2Q8NC54 265 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 LPAR4Q99677 370 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 KCNK13Q9HB14 408 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 HCN3Q9P1Z3 774 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 NAALAD2Q9Y3Q0 740 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 SCN3AQ9NY46 2000 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 APCP25054 2843 aa10.85□□□□□ -0.67
LRP1-209ENST00000555941 TRBC2A0A5B9 178 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 PRSS44E7EML9 344 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 TTI1O43156 1089 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 LCMT2O60294 686 aaKnown RBP10.84□□□□□ -0.67
LRP1-209ENST00000555941 F10P00742 488 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 AHSGP02765 367 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
LRP1-209ENST00000555941 ENO2P09104 434 aaPredicted RBP10.84□□□□□ -0.67
LRP1-209ENST00000555941 CDH1P12830 882 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 CD46P15529 392 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 JAK1P23458 1154 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 MST1P26927 711 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 GABRB3P28472 473 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 CA7P43166 264 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 TAS2R50P59544 299 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 RHAGQ02094 409 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 ACTN3Q08043 901 aaPredicted RBP10.84□□□□□ -0.67
LRP1-209ENST00000555941 NAA30Q147X3 362 aaPredicted RBP10.84□□□□□ -0.67
LRP1-209ENST00000555941 ABRAXAS2Q15018 415 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 PDSS2Q86YH6 399 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 BEST3Q8N1M1 668 aa10.84□□□□□ -0.67
LRP1-209ENST00000555941 ZNF808Q8N4W9 903 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms