RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 RBM20Q5T481 1227 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 FAAH2Q6GMR7 532 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MTFR2Q6P444 385 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PAQR3Q6TCH7 311 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MBOAT1Q6ZNC8 495 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 VN1R4Q7Z5H5 301 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 IGDCC3Q8IVU1 814 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 ZC3H7AQ8IWR0 971 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 KBTBD2Q8IY47 623 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 AMER2Q8N7J2 671 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MCOLN3Q8TDD5 553 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 EBNA1BP2Q99848 306 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 DDX47Q9H0S4 455 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 PLAC1Q9HBJ0 212 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MKKSQ9NPJ1 570 aaPredicted RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 CCDC177Q9NQR7 707 aaPredicted RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 TMEM184CQ9NVA4 438 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PLA2G3Q9NZ20 509 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 ABI3Q9P2A4 366 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 TRMT6Q9UJA5 497 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 SH2B3Q9UQQ2 575 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PDE10AQ9Y233 779 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 CPAMD8Q8IZJ3 1885 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 KCNE1BA0A087WTH5 132 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 LOC102723996A0A087X1L8 192 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CES2O00748 559 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 BMP10O95393 424 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 AHSGP02765 367 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SERPINA7P05543 415 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 HEXBP07686 556 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CELA2AP08217 269 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ANXA5P08758 320 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 HRH2P25021 359 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CXCR2P25025 360 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 IVDP26440 423 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SOX11P35716 441 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 RGS4P49798 205 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CDKN2DP55273 166 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CSNK1G2P78368 415 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 EEF1A2Q05639 463 aaKnown RBP10.22□□□□□ -0.77
TDP1-212ENST00000555565 INAQ16352 499 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 C3AR1Q16581 482 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 NDUFA9Q16795 377 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 PHKG1Q16816 387 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
TDP1-212ENST00000555565 LRRC8EQ6NSJ5 796 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 UGT3A1Q6NUS8 523 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 AGTRAPQ6RW13 159 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 TMEM205Q6UW68 189 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 PRSS41Q7RTY9 318 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 CNTN4Q8IWV2 1026 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SHISA5Q8N114 240 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SIRT6Q8N6T7 355 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 OR9A4Q8NGU2 314 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 BRIX1Q8TDN6 353 aaKnown RBP10.22□□□□□ -0.77
TDP1-212ENST00000555565 HAS2Q92819 552 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SLCO2A1Q92959 643 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 MAGEB10Q96LZ2 347 aaPredicted RBP10.22□□□□□ -0.77
TDP1-212ENST00000555565 CCDC138Q96M89 665 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 MACROD1Q9BQ69 325 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ZNF700Q9H0M5 742 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ATG10Q9H0Y0 220 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 PARVBQ9HBI1 364 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 RIC8BQ9NVN3 520 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 TAS2R13Q9NYV9 303 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 PTGFRNQ9P2B2 879 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SLC17A6Q9P2U8 582 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SEC14L3Q9UDX4 400 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ASIC3Q9UHC3 531 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 SH3BGRL2Q9UJC5 107 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 ACANP16112 2415 aa10.22□□□□□ -0.77
TDP1-212ENST00000555565 H0YIG0 161 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 SLC19A2O60779 497 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 NSA2O95478 260 aaKnown RBP10.21□□□□□ -0.77
TDP1-212ENST00000555565 CLDN14O95500 239 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 NADKO95544 446 aaPredicted RBP10.21□□□□□ -0.77
TDP1-212ENST00000555565 TTC4O95801 387 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 TSPAN12O95859 305 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 C8GP07360 202 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 CD99P14209 185 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 FDXRP22570 491 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 AVPR1BP47901 424 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 PGGT1BP53609 377 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 RPS15AP62244 130 aaKnown RBP10.21□□□□□ -0.77
TDP1-212ENST00000555565 SP140Q13342 867 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 NAE1Q13564 534 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 PCOLCEQ15113 449 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 BBS9Q3SYG4 887 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 SPANXN3Q5MJ09 141 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 TMEM214Q6NUQ4 689 aaKnown RBP10.21□□□□□ -0.77
TDP1-212ENST00000555565 RIPOR1Q6ZS17 1223 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 KIAA0408Q6ZU52 694 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 CEP97Q8IW35 865 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 TM4SF19Q96DZ7 209 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 LINGO1Q96FE5 620 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 CERS2Q96G23 380 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 IMMP1LQ96LU5 166 aa10.21□□□□□ -0.77
TDP1-212ENST00000555565 NAT9Q9BTE0 207 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms