RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LOC102723532A0A0G2JNH3 316 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ANKDD1BA6NHY2 528 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SMIM23A6NLE4 172 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF891A8MT65 544 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 H3BMH7 237 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 UBXN8O00124 270 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 COPEO14579 308 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 HAT1O14929 419 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 DSCR3O14972 297 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TAPBPO15533 448 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 UGDHO60701 494 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 GLRA3O75311 464 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TIAF1O95411 115 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ONECUT2O95948 504 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 MTHFD2P13995 350 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 KRT4P19013 534 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ITGAXP20702 1163 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SERPINB1P30740 379 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CRHR1P34998 444 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 RORAP35398 523 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 DLSTP36957 453 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CASP2P42575 452 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 AVPR1BP47901 424 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 IRF8Q02556 426 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 RGS1Q08116 209 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 RBBP5Q15291 538 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TGIF1Q15583 401 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ZXDCQ2QGD7 858 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PRTGQ2VWP7 1150 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 XKR6Q5GH73 641 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TECRLQ5HYJ1 363 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 LIPJQ5W064 366 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TMIGD1Q6UXZ0 262 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF517Q6ZMY9 492 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SLCO4C1Q6ZQN7 724 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TTLL10Q6ZVT0 673 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 TIPARPQ7Z3E1 657 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ASPGQ86U10 573 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 OR4N4Q8N0Y3 316 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PLD6Q8N2A8 252 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PMEPA1Q969W9 287 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ATP6V1E2Q96A05 226 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 NACC2Q96BF6 587 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 REPS1Q96D71 796 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 VPS50Q96JG6 964 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SLC45A3Q96JT2 553 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CATSPER2Q96P56 530 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 IQCGQ9H095 443 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 STMN4Q9H169 189 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CLK4Q9HAZ1 481 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PCMTD2Q9NV79 361 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 ARGLU1Q9NWB6 273 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 SENP1Q9P0U3 644 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 IFT80Q9P2H3 777 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 MID2Q9UJV3 735 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 NXT1Q9UKK6 140 aaKnown RBP10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PLAAQ9Y263 795 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 CACNA1DQ01668 2161 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 NBASA2RRP1 2371 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 NF1P21359 2839 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 K7ENP7 123 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 RGS16O15492 202 aaPredicted RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SERPINA6P08185 405 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 ATP5F1P24539 256 aaPredicted RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 PTPN4P29074 926 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 HNF4AP41235 474 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SCTRP47872 440 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 STXBP1P61764 594 aaKnown RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 YBX1P67809 324 aaKnown RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 PHEXP78562 749 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 OCA2Q04671 838 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TGM3Q08188 693 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 ASPHQ12797 758 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 GPS2Q13227 327 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 HERC3Q15034 1050 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 CATSPEREQ5SY80 951 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 C10orf62Q5T681 223 aaPredicted RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 FRMPD2BQ6IN97 320 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 INO80CQ6PI98 192 aaPredicted RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 LRIG3Q6UXM1 1119 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 ABHD13Q7L211 337 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SYVN1Q86TM6 617 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TEX9Q8N6V9 391 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SLC38A9Q8NBW4 561 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SRFBP1Q8NEF9 429 aaKnown RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 RDH11Q8TC12 318 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 EPS8L3Q8TE67 593 aaKnown RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 PPP4R1Q8TF05 950 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SNRNP27Q8WVK2 155 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms