RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	TSSK1B	Q9BXA7	367 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BRF2	Q9HAW0	419 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PARD6A	Q9NPB6	346 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SNX15	Q9NRS6	342 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	THAP1	Q9NVV9	213 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC2A6	Q9UGQ3	507 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CD207	Q9UJ71	328 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EMCN	Q9ULC0	261 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ENTPD2	Q9Y5L3	495 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OR51B4	Q9Y5P0	310 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C5orf42	Q9H799	3197 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KIAA1549L	Q6ZVL6	1849 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	REV3L	O60673	3130 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574		A0A096LPK6	155 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	WDR91	A4D1P6	747 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GOLGA8T	H3BQL2	631 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	INSIG1	O15503	277 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TIPRL	O75663	272 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MLYCD	O95822	493 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CD160	O95971	181 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TOP3B	O95985	862 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GSR	P00390	522 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CLEC3B	P05452	202 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RB1	P06400	928 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TROVE2	P10155	538 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NR2F6	P10588	404 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NEFH	P12036	1026 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IGFBP2	P18065	325 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MATN1	P21941	496 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FPR3	P25089	353 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PSMA3	P25788	255 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ALDH3A1	P30838	453 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC1A2	P43004	574 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RGR	P47804	291 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARF5	P84085	180 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LMAN2	Q12907	356 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CDH18	Q13634	790 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PTPRR	Q15256	657 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CYTH1	Q15438	398 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LRRK1	Q38SD2	2015 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MPPE1	Q53F39	396 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RUNDC3A	Q59EK9	446 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FSCB	Q5H9T9	825 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PLPP4	Q5VZY2	271 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DENND4A	Q7Z401	1863 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PXK	Q7Z7A4	578 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CMC1	Q7Z7K0	106 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NUDCD3	Q8IVD9	361 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DENND6A	Q8IWF6	608 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CARNMT1	Q8N4J0	409 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TDRD5	Q8NAT2	981 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LEMD2	Q8NC56	503 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RFWD2	Q8NHY2	731 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RP9	Q8TA86	221 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	METTL6	Q8TCB7	284 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BRSK1	Q8TDC3	778 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C10orf82	Q8WW14	230 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KCNJ9	Q92806	393 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EXTL1	Q92935	676 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ALG14	Q96F25	216 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ATXN7L3B	Q96GX2	97 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LOXL4	Q96JB6	756 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AIFM2	Q9BRQ8	373 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TDRD1	Q9BXT4	1180 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MFSD1	Q9H3U5	465 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	VPS28	Q9UK41	221 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FBXO5	Q9UKT4	447 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	USH1C	Q9Y6N9	552 aa		4.62	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TCF20	Q9UGU0	1960 aa	Known RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DBX1	A6NMT0	343 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TSPAN4	O14817	238 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CCL16	O15467	120 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SNAP91	O60641	907 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMCC2	O75069	709 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SNN	O75324	88 aa	Predicted RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GJB3	O75712	270 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DCTN3	O75935	186 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMCC1	O94876	653 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SCGB1D1	O95968	90 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PRKCG	P05129	697 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C2	P06681	752 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	APOA4	P06727	396 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DLD	P09622	509 aa	Known RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC35E2B	P0CK96	405 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EGR2	P11161	476 aa	Predicted RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	UBL4A	P11441	157 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARSA	P15289	507 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	STMN1	P16949	149 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HOXB8	P17481	243 aa	Predicted RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PTPN2	P17706	415 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ENG	P17813	658 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BGN	P21810	368 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CRABP2	P29373	138 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AVPR1A	P37288	418 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CCR2	P41597	374 aa		4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LEPR	P48357	1165 aa	Known RBP	4.61	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CD151	P48509	253 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms