RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 OR9I1Q8NGQ6 314 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 APOLD1Q96LR9 279 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
APEX1-205ENST00000553555 MS4A8Q9BY19 250 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
APEX1-205ENST00000553555 RAB33BQ9H082 229 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 ZIM2Q9NZV7 527 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 CCDC167Q9P0B6 97 aa13.16□□□□□ -0.3
APEX1-205ENST00000553555 RUVBL1Q9Y265 456 aaKnown RBP13.16□□□□□ -0.3
APEX1-205ENST00000553555 SCN3AQ9NY46 2000 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 DMDP11532 3685 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 GPR179Q6PRD1 2367 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 KHNYNO15037 678 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 ANKRD28O15084 1053 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 SIGLEC6O43699 453 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 HNRNPCL1O60812 293 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 MYF5P13349 255 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 PVRP15151 417 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 PCSK2P16519 638 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 ENGP17813 658 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 OR1D5P58170 312 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 NCALDP61601 193 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 RPS15AP62244 130 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 CYLC2Q14093 348 aaPredicted RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 NR1D2Q14995 579 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 KHDRBS2Q5VWX1 349 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 GK5Q6ZS86 529 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 FAM181AQ8N9Y4 354 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 TRPV3Q8NET8 790 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 BAHD1Q8TBE0 780 aaPredicted RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 PROKR1Q8TCW9 393 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 GTPBP2Q9BX10 602 aaKnown RBP13.15□□□□□ -0.3
APEX1-205ENST00000553555 SEMA6CQ9H3T2 930 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 ACTL8Q9H568 366 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 TMEM45AQ9NWC5 275 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 DLGAP4Q9Y2H0 992 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
APEX1-205ENST00000553555 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 B4GAT1O43505 415 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 CTSVO60911 334 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 SLC22A3O75751 556 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 MYO1DO94832 1006 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
APEX1-205ENST00000553555 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 ZFP36L2P47974 494 aaKnown RBP13.14□□□□□ -0.31
APEX1-205ENST00000553555 CPA2P48052 419 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 RAE1P78406 368 aaKnown RBP13.14□□□□□ -0.31
APEX1-205ENST00000553555 MAPRE2Q15555 327 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 GALNT18Q6P9A2 607 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 SNX32Q86XE0 403 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 TEX37Q96LM6 180 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 TRAPPC9Q96Q05 1148 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 KLHL25Q9H0H3 589 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 EPB41L1Q9H4G0 881 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 SYNPO2LQ9H987 977 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 BAIAP2L1Q9UHR4 511 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 SPTBP11277 2137 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
APEX1-205ENST00000553555 LY6G6EA0A0G2JKS1 128 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 B2RBV5 119 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SAP18O00422 153 aaKnown RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 PRAMEF10O60809 474 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SEMA3DO95025 777 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SERPIND1P05546 499 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SNRPB2P08579 225 aaKnown RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 PNLIPP16233 465 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SDC1P18827 310 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 CDH3P22223 829 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TACR1P25103 407 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 PTPN4P29074 926 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 IL12AP29459 219 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 RASSF2P50749 326 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 MNAT1P51948 309 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 HYAL2Q12891 473 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 PTGR1Q14914 329 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 NR0B2Q15466 257 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TCEAL6Q6IPX3 200 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms