RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
SYNE3-202ENST00000553340 OVCA2Q8WZ82 227 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 MAL2Q969L2 176 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 CHST8Q9H2A9 424 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 IMPAD1Q9NX62 359 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 ZDHHC3Q9NYG2 299 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF226Q9NYT6 803 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 NPAP1Q9NZP6 1156 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 NDUFAF4Q9P032 175 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 VPS29Q9UBQ0 182 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 RUVBL1Q9Y265 456 aaKnown RBP16.93■□□□□ 0.3
SYNE3-202ENST00000553340 CFL2Q9Y281 166 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 YY2O15391 372 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 PTX3P26022 381 aaPredicted RBP16.93■□□□□ 0.3
SYNE3-202ENST00000553340 SELENOWP63302 87 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 TIMM50Q3ZCQ8 353 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 SPATC1Q76KD6 591 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 CCDC190Q86UF4 302 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 C2orf69Q8N8R5 385 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 VPS37AQ8NEZ2 397 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 CEP19Q96LK0 163 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 COPS8Q99627 209 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 EMILIN2Q9BXX0 1053 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF221Q9UK13 617 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
SYNE3-202ENST00000553340 AGAP14A8MT82 685 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 PDZK1P1A8MUH7 402 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 IDH3BO43837 385 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 KIAA0513O60268 411 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 GABRB1P18505 474 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 GKP32189 559 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 PCGF2P35227 344 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 CSKP41240 450 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 PIK3CBP42338 1070 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 IRF3Q14653 427 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 RGNQ15493 299 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 TOR1AIP1Q5JTV8 583 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF544Q6NX49 715 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF367Q7RTV3 350 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 TSEN54Q7Z6J9 526 aaKnown RBP16.92■□□□□ 0.3
SYNE3-202ENST00000553340 NLGN4XQ8N0W4 816 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 CYP4Z2PQ8N1L4 340 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 C11orf65Q8NCR3 313 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 C9orf43Q8TAL5 461 aaPredicted RBP16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ASB11Q8WXH4 323 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 CCDC32Q9BV29 185 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 MARCH5Q9NX47 278 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 FBXL12Q9NXK8 326 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 DUSP12Q9UNI6 340 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 OR51B4Q9Y5P0 310 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 NOX1Q9Y5S8 564 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 SCN8AQ9UQD0 1980 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 KRT75O95678 551 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 SLC15A1P46059 708 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 OR2B6P58173 313 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 C21orf58P58505 322 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ZXDBP98169 803 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 GPR26Q8NDV2 337 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 OR52J3Q8NH60 311 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 OR2B2Q9GZK3 357 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 RLIMQ9NVW2 624 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 BTNL2Q9UIR0 455 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 BTBD3Q9Y2F9 522 aa16.92■□□□□ 0.3
SYNE3-202ENST00000553340 WBP11Q9Y2W2 641 aaKnown RBP16.92■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF106Q9H2Y7 1883 aaKnown RBP16.92■□□□□ 0.3
SYNE3-202ENST00000553340 TMEM229AB2RXF0 380 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 OR56A5P0C7T3 313 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CRISP3P54108 245 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 IRF8Q02556 426 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF33BQ06732 778 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 ACSM2AQ08AH3 577 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CPTPQ5TA50 214 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 ACSM2BQ68CK6 577 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CCM2Q9BSQ5 444 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 MS4A12Q9NXJ0 267 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 TRPM5Q9NZQ8 1165 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 C1orf226A1L170 272 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 SCAMP2O15127 329 aaKnown RBP16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CDH12P55289 794 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 SPIBQ01892 262 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CDH18Q13634 790 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 MICAQ29983 383 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 HKDC1Q2TB90 917 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 MFSD14CQ5VZR4 134 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 TSPAN33Q86UF1 283 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 LGI4Q8N135 537 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 DCAF4L2Q8NA75 395 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 B3GNT7Q8NFL0 401 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 NIPSNAP1Q9BPW8 284 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 SLC30A2Q9BRI3 323 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 KLF16Q9BXK1 252 aaPredicted RBP16.91■□□□□ 0.3
SYNE3-202ENST00000553340 ATG10Q9H0Y0 220 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 ZNF556Q9HAH1 456 aa16.91■□□□□ 0.3
SYNE3-202ENST00000553340 CRNNQ9UBG3 495 aaPredicted RBP16.91■□□□□ 0.3
SYNE3-202ENST00000553340 FAM172BPA6NC97 362 aa16.9■□□□□ 0.3
SYNE3-202ENST00000553340 SMAD6O43541 496 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms