RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TMIGD1Q6UXZ0 262 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 USP30Q70CQ3 517 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CARM1Q86X55 608 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 ZZZ3Q8IYH5 903 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TBC1D3Q8IZP1 549 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 KRT78Q8N1N4 520 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CBR4Q8N4T8 237 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 LINC01555Q8NAE3 123 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 C16orf78Q8WTQ4 265 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 DNASE1L2Q92874 299 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 FAM162AQ96A26 154 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CXorf40BQ96DE9 158 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SCARF2Q96GP6 870 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CNBD2Q96M20 576 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 RNF145Q96MT1 663 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PANX1Q96RD7 426 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 FERD3LQ96RJ6 166 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CHID1Q9BWS9 393 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 MS4A8Q9BY19 250 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 UGT2B28Q9BY64 529 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 REEP4Q9H6H4 257 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 NT5DC2Q9H857 520 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 FGF22Q9HCT0 170 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 PRM3Q9NNZ6 103 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 OLAHQ9NV23 265 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 LIMD1Q9UGP4 676 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 ADGRE2Q9UHX3 823 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 ZNF639Q9UID6 485 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 MOSPD1Q9UJG1 213 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 SUFUQ9UMX1 484 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 OAZ3Q9UMX2 235 aa11.05□□□□□ -0.64
RAB5C-208ENST00000551338 TP53BP1Q12888 1972 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-208ENST00000551338 CCDC88CQ9P219 2028 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GNG14A0A1W2PPG7 69 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 C1orf226A1L170 272 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CLIC1O00299 241 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CACNB4O00305 520 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 UPK1AO00322 258 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 EI24O14681 340 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 MAP3K13O43283 966 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 KCNJ13O60928 360 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 PRSS23O95084 383 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GBAP04062 536 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 RETP07949 1114 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 FURINP09958 794 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GPX2P18283 190 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 NDUFV2P19404 249 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GAB1Q13480 694 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CLCA4Q14CN2 919 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 PRSS53Q2L4Q9 553 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 FAM98BQ52LJ0 330 aaKnown RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CPTPQ5TA50 214 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CPZQ66K79 652 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 FAM71E1Q6IPT2 247 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 KIAA1324Q6UXG2 1013 aaKnown RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 SERPINA11Q86U17 422 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 SLC9B2Q86UD5 537 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 FAM124AQ86V42 546 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 PTOV1Q86YD1 416 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 APLFQ8IW19 511 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 ANKRD53Q8N9V6 530 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 DENND6BQ8NEG7 585 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 ABHD11Q8NFV4 315 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 NETO1Q8TDF5 533 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 NCLNQ969V3 563 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 SLC47A1Q96FL8 570 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 MRGPRX1Q96LB2 322 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 OR2M4Q96R27 311 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 AIF1LQ9BQI0 150 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 BHLHE41Q9C0J9 482 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 PCBD2Q9H0N5 130 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CHST8Q9H2A9 424 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 RHBGQ9H310 441 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 NTN4Q9HB63 628 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 C8orf4Q9NR00 106 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 DCAF13Q9NV06 445 aaKnown RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 IMP3Q9NV31 184 aaKnown RBP11.04□□□□□ -0.64
RAB5C-208ENST00000551338 UTS2RQ9UKP6 389 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 NCKAP1Q9Y2A7 1128 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 GMEB1Q9Y692 573 aa11.04□□□□□ -0.64
RAB5C-208ENST00000551338 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 PRSS38A1L453 326 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 POM121BA6NF01 834 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CCDC85CA6NKD9 419 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 EVPLLA8MZ36 301 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 SCAMP1O15126 338 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CLOCKO15516 846 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 DEAF1O75398 565 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 PRKD3O94806 890 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 SEMA3DO95025 777 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 HOXC4P09017 264 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 IL1RNP18510 177 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 TPP2P29144 1249 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms