RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SNRPD2P62316 118 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 VMACQ2NL98 169 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PRAMEF17Q5VTA0 474 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CHPT1Q8WUD6 406 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CLIP3Q96DZ5 547 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 MAELQ96JY0 434 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 ZSWIM3Q96MP5 696 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PPIL3Q9H2H8 161 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 FARSBQ9NSD9 589 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 NUDT15Q9NV35 164 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC22A14Q9Y267 594 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 TLR6Q9Y2C9 796 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 GADD45AP24522 165 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 KHKP50053 298 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PSMA6P60900 246 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 SPHARQ15513 63 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 WDR45BQ5MNZ6 344 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 RAB12Q6IQ22 244 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 NPAS3Q8IXF0 933 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 NDNFQ8TB73 568 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 MTMR10Q9NXD2 777 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 CD84Q9UIB8 345 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 PCDHGB1Q9Y5G3 927 aa15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 HEMK1Q9Y5R4 338 aaPredicted RBP15.33■□□□□ 0.04
RBFOX1-212ENST00000550418 DGKGP49619 791 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 AP1S2P56377 157 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 C1QTNF8P60827 252 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SPIN4Q56A73 249 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 ZNF782Q6ZMW2 699 aaPredicted RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 Q6ZNX1 250 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CADM2Q8N3J6 435 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 DPCDQ9BVM2 203 aaPredicted RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 TSSK6Q9BXA6 273 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 FKBP14Q9NWM8 211 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 DOT1LQ8TEK3 1739 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 A0A096LPI6 279 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SOWAHBA6NEL2 793 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 B4GAT1O43505 415 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SCN2BO60939 215 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 RAB36O95755 333 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CAPN3P20807 821 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 F8A1P23610 371 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 OR1D2P34982 312 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 APLP1P51693 650 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 FAM129BQ96TA1 746 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 COMMD4Q9H0A8 199 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 NDOR1Q9UHB4 597 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SAP18O00422 153 aaKnown RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 NRP1O14786 923 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 WNT9AO14904 365 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 USP41Q3LFD5 358 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 ENPP6Q6UWR7 440 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 GPALPP1Q8IXQ4 340 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 COQ8AQ8NI60 647 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CMTM7Q96FZ5 175 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 GAL3ST1Q99999 423 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 ABCG5Q9H222 651 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 MAGIXQ9H6Y5 334 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 FOLH1BQ9HBA9 442 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 AGPAT4Q9NRZ5 378 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 IMP3Q9NV31 184 aaKnown RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 MGAT4BQ9UQ53 548 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 TREHO43280 583 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC19A2O60779 497 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 STBD1O95210 358 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 BCHEP06276 602 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 GGT1P19440 569 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CELP19835 753 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 CPOXP36551 454 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC3A1Q07837 685 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 NFE2L1Q14494 772 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 ATXN7L2Q5T6C5 722 aaPredicted RBP15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 MEDAGQ5VYS4 303 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 FBXL22Q6P050 247 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 SPERTQ8NA61 448 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 BRINP2Q9C0B6 783 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 ABCB8Q9NUT2 735 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 PCDHGB7Q9Y5F8 929 aa15.32■□□□□ 0.04
RBFOX1-212ENST00000550418 TCRBV3S1A0A5B6 114 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 OR1E2P47887 323 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ARHGDIBP52566 201 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 DSG2Q14126 1118 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC30A6Q6NXT4 461 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 TAS1R3Q7RTX0 852 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 IQCHQ86VS3 1027 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ZFAND4Q86XD8 727 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ADGRG5Q8IZF4 528 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 OR10T2Q8NGX3 314 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 RERGQ96A58 199 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CXorf40BQ96DE9 158 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 NDC1Q9BTX1 674 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 EFCAB11Q9BUY7 163 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CST11Q9H112 138 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms