RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 DTD2Q96FN9 168 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 RASL10BQ96S79 203 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 PKP2Q99959 881 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 FAM213AQ9BRX8 229 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 OR2B2Q9GZK3 357 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 UBQLN3Q9H347 655 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 RWDD1Q9H446 243 aaPredicted RBP5.25□□□□□ -1.57
HCFC2-204ENST00000550335 EBF2Q9HAK2 575 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 GPN1Q9HCN4 374 aaPredicted RBP5.25□□□□□ -1.57
HCFC2-204ENST00000550335 PRMT8Q9NR22 394 aaPredicted RBP5.25□□□□□ -1.57
HCFC2-204ENST00000550335 PNPLA3Q9NST1 481 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 ACTR3BQ9P1U1 418 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 SPASTQ9UBP0 616 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 TRMT6Q9UJA5 497 aaKnown RBP5.25□□□□□ -1.57
HCFC2-204ENST00000550335 TMED7Q9Y3B3 224 aa5.25□□□□□ -1.57
HCFC2-204ENST00000550335 C2orf92A0A1B0GVN3 265 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 A0A1W2PN81 502 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 LACTBL1A8MY62 500 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 PRDM1O75626 825 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 OAZ2O95190 189 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 BAG3O95817 575 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 ALPLP05186 524 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CHRNGP07510 517 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CETPP11597 493 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 AREGP15514 252 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CCNA2P20248 432 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 SFNP31947 248 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CHRNA7P36544 502 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 HUNKP57058 714 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 SRP54P61011 504 aaKnown RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 KIF5AQ12840 1032 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 DMP1Q13316 513 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CDH18Q13634 790 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CCDC142Q17RM4 750 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 CCDC40Q4G0X9 1142 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 ARMCX4Q5H9R4 360 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 AGAP6Q5VW22 663 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 AWAT2Q6E213 333 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 WDR88Q6ZMY6 472 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 ARMC9Q7Z3E5 817 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 PRUNE1Q86TP1 453 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 EXOC3L1Q86VI1 746 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 SPATA2LQ8IUW3 424 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 LAX1Q8IWV1 398 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 TDHQ8IZJ6 230 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 METTL27Q8N6F8 245 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 OR7A2PQ8NGA2 310 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 NUDCD2Q8WVJ2 157 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 GGHQ92820 318 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 ULK4Q96C45 1275 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 ST6GAL2Q96JF0 529 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 C16orf45Q96MC5 204 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 BTBD9Q96Q07 612 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 C1QTNF4Q9BXJ3 329 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 TFB2MQ9H5Q4 396 aaKnown RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 MAGEF1Q9HAY2 307 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 GPR173Q9NS66 373 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 C19orf25Q9UFG5 118 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 KCNJ14Q9UNX9 436 aa5.24□□□□□ -1.57
HCFC2-204ENST00000550335 GREB1LQ9C091 1923 aaPredicted RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 MYH14Q7Z406 1995 aaKnown RBP5.24□□□□□ -1.57
HCFC2-204ENST00000550335 PFASO15067 1338 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 EPRSP07814 1512 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 KIF13AQ9H1H9 1805 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 TRBV2A0A0J9YWF9 115 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 MACROD2A1Z1Q3 448 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 CCDC162PA2VCL2 907 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 ARHGAP42A6NI28 874 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 M0R296 226 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 TULP2O00295 520 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GUCA1CO95843 209 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 ATP1A1P05023 1023 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 FGF5P12034 268 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 EFNA1P20827 205 aaPredicted RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GLIPR1P48060 266 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 HNRNPFP52597 415 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GAGE5Q13069 117 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GAGE6Q13070 117 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 RBM39Q14498 530 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 KARSQ15046 597 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 KRT31Q15323 416 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 CARTPTQ16568 116 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GPR33Q49SQ1 333 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 SLC25A53Q5H9E4 307 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 LCN1P1Q5VSP4 162 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 ZNF770Q6IQ21 691 aaPredicted RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 IL17RELQ6ZVW7 336 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 PRSS35Q8N3Z0 413 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 GBP7Q8N8V2 638 aaPredicted RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 KBTBD3Q8NAB2 608 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 OR4A16Q8NH70 328 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 WBP2Q969T9 261 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 NSMCE2Q96MF7 247 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 DUX5Q96PT3 197 aa5.23□□□□□ -1.57
HCFC2-204ENST00000550335 PRMT1Q99873 361 aaKnown RBP5.23□□□□□ -1.57
HCFC2-204ENST00000550335 FAM49AQ9H0Q0 323 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms