RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CRYBA2P53672 197 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 ZNF177Q13360 481 aaPredicted RBP22.31■■□□□ 1.16
NPAS3-206ENST00000548645 CCL15Q16663 113 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 FAM209AQ5JX71 171 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 TMPRSS11AQ6ZMR5 421 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 LRRC70Q7Z2Q7 622 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 ZFYVE19Q96K21 471 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 EBPLQ9BY08 206 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 CNOT2Q9NZN8 540 aaKnown RBP22.31■■□□□ 1.16
NPAS3-206ENST00000548645 NDUFAF4Q9P032 175 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 MUTYHQ9UIF7 546 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 CYP2A7P20853 494 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 AQP1P29972 269 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 NFATC2Q13469 925 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 CDKL4Q5MAI5 379 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 LDLRAD1Q5T700 205 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 NOXA1Q86UR1 476 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 CLECL1Q8IZS7 167 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 OR8J2Q8NGG1 315 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 ADAM2Q99965 735 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 PLSCR3Q9NRY6 295 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 RLIMQ9NVW2 624 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 CFAP20Q9Y6A4 193 aaKnown RBP22.3■■□□□ 1.16
NPAS3-206ENST00000548645 GDF15Q99988 308 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 ASPNQ9BXN1 380 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 ZNF556Q9HAH1 456 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 Q9Y3F1 56 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 GPX5O75715 221 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 NUDT7P0C024 238 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 MACC1Q6ZN28 852 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 TSEN54Q7Z6J9 526 aaKnown RBP22.3■■□□□ 1.16
NPAS3-206ENST00000548645 LGI4Q8N135 537 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 CORO2BQ9UQ03 480 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 V9GYH0 126 aa22.3■■□□□ 1.16
NPAS3-206ENST00000548645 SH3D21A4FU49 640 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 GAPDHSO14556 408 aaPredicted RBP22.29■■□□□ 1.16
NPAS3-206ENST00000548645 SELENOWP63302 87 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 GALK2Q01415 458 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 MICAQ29983 383 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 ZNF438Q7Z4V0 828 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 RNF170Q96K19 258 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 NIPSNAP1Q9BPW8 284 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 CNPPD1Q9BV87 410 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 BBS2Q9BXC9 721 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 EXOSC4Q9NPD3 245 aaKnown RBP22.29■■□□□ 1.16
NPAS3-206ENST00000548645 FLRT1Q9NZU1 646 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 ALPIP09923 528 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 PPIBP23284 216 aaKnown RBP22.29■■□□□ 1.16
NPAS3-206ENST00000548645 ACRV1P26436 265 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 CDC42P60953 191 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 MGAT3Q09327 533 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 TEAD4Q15561 434 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 HKDC1Q2TB90 917 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 LYPLAL1Q5VWZ2 237 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 GDF6Q6KF10 455 aaPredicted RBP22.29■■□□□ 1.16
NPAS3-206ENST00000548645 GPR151Q8TDV0 419 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 ASB15Q8WXK1 588 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 TAPBPLQ9BX59 468 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 KLHL20Q9Y2M5 609 aa22.29■■□□□ 1.16
NPAS3-206ENST00000548645 PLXNA4Q9HCM2 1894 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 FZD6O60353 706 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 IL7P13232 177 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 PCGF2P35227 344 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SPIBQ01892 262 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SCN1BQ07699 218 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SLAMF1Q13291 335 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 DSC3Q14574 896 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SSX1Q16384 188 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 BAK1Q16611 211 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 FAM110CQ1W6H9 321 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 YIF1BQ5BJH7 314 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 FRG2Q64ET8 278 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 L3MBTL4Q8NA19 623 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 OR4C15Q8NGM1 316 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 OR52J3Q8NH60 311 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 WDR36Q8NI36 951 aaKnown RBP22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SLC7A6Q92536 515 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 FRG2BQ96QU4 278 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 RPRD1BQ9NQG5 326 aaKnown RBP22.28■■□□□ 1.16
NPAS3-206ENST00000548645 CRLS1Q9UJA2 301 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 TFECO14948 347 aaPredicted RBP22.28■■□□□ 1.16
NPAS3-206ENST00000548645 ALDH9A1P49189 494 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 CDH12P55289 794 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 TRIM60Q495X7 471 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 LINGO4Q6UY18 593 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 FCRL1Q96LA6 429 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 SLC22A4Q9H015 551 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 CHST8Q9H2A9 424 aa22.28■■□□□ 1.16
NPAS3-206ENST00000548645 A8MVJ9 347 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 TMEM229AB2RXF0 380 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 RPS19P39019 145 aaKnown RBP22.27■■□□□ 1.16
NPAS3-206ENST00000548645 RORCP51449 518 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 ARF5P84085 180 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 RNF219Q5W0B1 726 aaPredicted RBP22.27■■□□□ 1.16
NPAS3-206ENST00000548645 C11orf65Q8NCR3 313 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 MAL2Q969L2 176 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 MS4A4AQ96JQ5 239 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 RIPOR3Q96MK2 946 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 HTATIP2Q9BUP3 242 aa22.27■■□□□ 1.16
NPAS3-206ENST00000548645 M0R129 80 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms