RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 KCNC1P48547 511 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 SERPINB9P50453 376 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 SOX8P57073 446 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 NFATC3Q12968 1075 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 CDC16Q13042 620 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 CHAF1BQ13112 559 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 FAM83EQ2M2I3 478 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 LACTB2Q53H82 288 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 DCAF10Q5QP82 559 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 TRMT10CQ7L0Y3 403 aaKnown RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 TMPRSS11BQ86T26 416 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 AFAP1L2Q8N4X5 818 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 ZNF740Q8NDX6 193 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 MIEF2Q96C03 454 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 MRRFQ96E11 262 aaKnown RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 MMABQ96EY8 250 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 SEC16BQ96JE7 1060 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 TSNARE1Q96NA8 513 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 PAFAH2Q99487 392 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 PITHD1Q9GZP4 211 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 SPNS1Q9H2V7 528 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 EHD1Q9H4M9 534 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 SOX17Q9H6I2 414 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 ALG9Q9H6U8 611 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 MKKSQ9NPJ1 570 aaPredicted RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 C14orf105Q9NVL8 296 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 WWOXQ9NZC7 414 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 NUDT4Q9NZJ9 180 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 PTBP2Q9UKA9 531 aaKnown RBP11.27□□□□□ -0.61
YBX3-217ENST00000546164 RNF112Q9ULX5 631 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 PCDHGB7Q9Y5F8 929 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 HS3ST3B1Q9Y662 390 aa11.27□□□□□ -0.61
YBX3-217ENST00000546164 PCSK5Q92824 1860 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 A0A096LPK6 155 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 A0A1W2PQ72 361 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 NCF1BA6NI72 391 aaPredicted RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 NCF1CA8MVU1 366 aaPredicted RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 AGPSO00116 658 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 SOCS6O14544 535 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 PCDH17O14917 1159 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 OR1F1O43749 312 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 STK16O75716 305 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 KRT38O76015 456 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 CYC1P08574 325 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 RHOXF2BP0C7M4 288 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 C1GALT1C1LP0DN25 315 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 NCF1P14598 390 aaPredicted RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 CXCR2P25025 360 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 GSTM2P28161 218 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 TYK2P29597 1187 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 CCL11P51671 97 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 SNRPNP63162 240 aaKnown RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 MEF2AQ02078 507 aaPredicted RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 KLC1Q07866 573 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 E2F2Q14209 437 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 HERC3Q15034 1050 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 ACAP2Q15057 778 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 UAP1Q16222 522 aaPredicted RBP11.26□□□□□ -0.61
YBX3-217ENST00000546164 VWA2Q5GFL6 755 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 ATG9BQ674R7 924 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 NIPAL1Q6NVV3 410 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 KIRREL2Q6UWL6 708 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 LRRC70Q7Z2Q7 622 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 ANKRD53Q8N9V6 530 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 KCT2Q8NC54 265 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 UBTD2Q8WUN7 234 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 KCTD4Q8WVF5 259 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 NXNL1Q96CM4 212 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 WDR34Q96EX3 536 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 VPS50Q96JG6 964 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 GPR78Q96P69 363 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 MACROD1Q9BQ69 325 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 RHOXF2Q9BQY4 288 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 CRB3Q9BUF7 120 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 SLC25A23Q9BV35 468 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 DNAJC11Q9NVH1 559 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 CD274Q9NZQ7 290 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 TP53TG5Q9Y2B4 290 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 IKBKGQ9Y6K9 419 aa11.26□□□□□ -0.61
YBX3-217ENST00000546164 SYCE1LA8MT33 242 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 K7EM74 188 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 NDUFS4O43181 175 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 RIPK2O43353 540 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 SUV39H1O43463 412 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 KLK8O60259 260 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 KLHL2O95198 593 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 STATHP02808 62 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 S100BP04271 92 aaPredicted RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 MTHFD2P13995 350 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 EPORP19235 508 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 VARSP26640 1264 aaKnown RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 MSH2P43246 934 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms