RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CD52P31358 61 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 HMGCLP35914 325 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PRIM2P49643 509 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 WNT3P56703 355 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 C5orf22Q49AR2 442 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 SLC7A6Q92536 515 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 EID2BQ96D98 161 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 RNF170Q96K19 258 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 MMP28Q9H239 520 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 RANGRFQ9HD47 186 aaPredicted RBP13.71□□□□□ -0.22
SRP54-202ENST00000546080 FAM120CQ9NX05 1096 aaKnown RBP13.71□□□□□ -0.22
SRP54-202ENST00000546080 ARL15Q9NXU5 204 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 NDUFAF4Q9P032 175 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 FZD4Q9ULV1 537 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PCDHB11Q9Y5F2 797 aa13.71□□□□□ -0.22
SRP54-202ENST00000546080 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 CCDC182A6NF36 153 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
SRP54-202ENST00000546080 CRYBA2P53672 197 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 CDH12P55289 794 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 DAB2P98082 770 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 PURAQ00577 322 aaKnown RBP13.7□□□□□ -0.22
SRP54-202ENST00000546080 DSC3Q14574 896 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 TAB1Q15750 504 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 SSX1Q16384 188 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 YIF1BQ5BJH7 314 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 GPRC6AQ5T6X5 926 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 NCEH1Q6PIU2 408 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 LAX1Q8IWV1 398 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 CHTF18Q8WVB6 975 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 MED30Q96HR3 178 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 ZNF556Q9HAH1 456 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 GIMAP4Q9NUV9 329 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
SRP54-202ENST00000546080 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
SRP54-202ENST00000546080 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 A0A0U1RQF3 1178 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 A0A1W2PQ09 198 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 SCN2BO60939 215 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ALPIP09923 528 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ACPPP15309 386 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 TNFRSF1BP20333 461 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ITGALP20701 1170 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 RPIAP49247 311 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 RORCP51449 518 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 CDC42P60953 191 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ZXDBP98169 803 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 SCN1BQ07699 218 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 BOP1Q14137 746 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 ZNF79Q15937 498 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 MICAQ29983 383 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 EXOC3L2Q2M3D2 409 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 LRRC70Q7Z2Q7 622 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 MAL2Q969L2 176 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 FYTTD1Q96QD9 318 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 BARHL1Q9BZE3 327 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 TRIM39Q9HCM9 518 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 TIGARQ9NQ88 270 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 NUFIP1Q9UHK0 495 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 H3BNC9 293 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 OAZ2O95190 189 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 CRYZL1O95825 349 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 PCGF2P35227 344 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 RPS19P39019 145 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 RUNX1T1Q06455 604 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 NFATC2Q13469 925 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 TSEN54Q7Z6J9 526 aaKnown RBP13.69□□□□□ -0.22
SRP54-202ENST00000546080 GALNT6Q8NCL4 622 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 OR4C15Q8NGM1 316 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 COQ8BQ96D53 544 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 TAPBPLQ9BX59 468 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 SRRQ9GZT4 340 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 CRLS1Q9UJA2 301 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 AP1M2Q9Y6Q5 423 aa13.69□□□□□ -0.22
SRP54-202ENST00000546080 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 SH3D21A4FU49 640 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 UPK3BL1B0FP48 263 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 NT5C1B-RDH14C9J2C7 533 aa13.68□□□□□ -0.22
SRP54-202ENST00000546080 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.68□□□□□ -0.22
SRP54-202ENST00000546080 UPK3BL2E5RIL1 263 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms