RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 AHRP35869 848 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 USP8P40818 1118 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 MAGEB1P43366 347 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 NKX2-1P43699 371 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 PGGT1BP53609 377 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 ARF5P84085 180 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 RASGEF1BQ0VAM2 473 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 TWIST1Q15672 202 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 UGP2Q16851 508 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 SPOUT1Q5T280 376 aaKnown RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 STXBP5Q5T5C0 1151 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 CST9Q5W186 159 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 PACS1Q6VY07 963 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 PIWIL4Q7Z3Z4 852 aaKnown RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 TMEM139Q8IV31 216 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 LRRC8CQ8TDW0 803 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 P2RX5Q93086 422 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 LINGO1Q96FE5 620 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 CDCA5Q96FF9 252 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 C5orf30Q96GV9 206 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 GAL3ST4Q96RP7 486 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 MYADMQ96S97 322 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 ATG101Q9BSB4 218 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 SPXQ9BT56 116 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 XPO4Q9C0E2 1151 aaKnown RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 S1PR5Q9H228 398 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 RNPEPL1Q9HAU8 725 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 LRRC4Q9HBW1 653 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 GSN-AS1Q9NRJ2 163 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 PHPT1Q9NRX4 125 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 ANO10Q9NW15 660 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 WNT16Q9UBV4 365 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 IL19Q9UHD0 177 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 GMEB2Q9UKD1 530 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 RALYQ9UKM9 306 aaKnown RBP3.8□□□□□ -1.8
SNHG1-222ENST00000545308 ARFGEF2Q9Y6D5 1785 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 A0A1W2PP64 1363 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 C13orf42A0A1B0GVH6 325 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 KRT87PA6NCN2 255 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 C4orf47A7E2U8 309 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PRSS46E5RG02 174 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 CAPN9O14815 690 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 RNASEH1O60930 286 aaKnown RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 B3GALNT1O75752 331 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 IRF2P14316 349 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 RPL21P46778 160 aaKnown RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 OR3A1P47881 315 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 HTR6P50406 440 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 SERPINH1P50454 418 aaKnown RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PDLIM4P50479 330 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PEX5P50542 639 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 CASP9P55211 416 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 HUNKP57058 714 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 ILF2Q12905 390 aaKnown RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 MFAP5Q13361 173 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 DUOXA1Q1HG43 343 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 ITPRIPL2Q3MIP1 535 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PRSS42Q7Z5A4 293 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 LONP2Q86WA8 852 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 NUDT13Q86X67 352 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 KMT5CQ86Y97 462 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 SERPINA12Q8IW75 414 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.79□□□□□ -1.81e-8■■■□□ 17.9
SNHG1-222ENST00000545308 ZNF441Q8N8Z8 693 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PPFIBP2Q8ND30 876 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 RDM1Q8NG50 284 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 LILRB1Q8NHL6 650 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 CCDC107Q8WV48 283 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 EPSTI1Q96J88 318 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 SGK494Q96LW2 274 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 SPATA13Q96N96 652 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 RUNDC3BQ96NL0 473 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 TRAF4Q9BUZ4 470 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PRRG4Q9BZD6 226 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 ACPTQ9BZG2 426 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 UBTD1Q9HAC8 227 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 A4GALTQ9NPC4 353 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PTTG2Q9NZH5 202 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 KLK4Q9Y5K2 254 aa3.79□□□□□ -1.8
SNHG1-222ENST00000545308 CARMIL3Q8ND23 1372 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 RNF123Q5XPI4 1314 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CDHR2Q9BYE9 1310 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 A0A1W2PRB8 838 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ILVBLA1L0T0 632 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 ATP9AO75110 1047 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 RPS6KA5O75582 802 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 STAM2O75886 525 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CRYABP02511 175 aaKnown RBP3.78□□□□□ -1.8
SNHG1-222ENST00000545308 C9P02748 559 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 SERPING1P05155 500 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 SBK2P0C263 348 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CDH1P12830 882 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 MYL6BP14649 208 aa3.78□□□□□ -1.8
SNHG1-222ENST00000545308 CAPN2P17655 700 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms