RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CCDC181Q5TID7 509 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 KANK2Q63ZY3 851 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 HMBOX1Q6NT76 420 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 PPP1R2P3Q6NXS1 205 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF449Q6P9G9 518 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM220Q6QAJ8 160 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ARSKQ6UWY0 536 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 PRSS57Q6UWY2 283 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 C3P1Q6ZMU1 363 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 FAM83HQ6ZRV2 1179 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 AMIGO1Q86WK6 493 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 PHF13Q86YI8 300 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 CREBRFQ8IUR6 639 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 P3H2Q8IVL5 708 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SIAH3Q8IW03 269 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 LRRC75A-AS1Q8N1F1 130 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 BHLHE22Q8NFJ8 381 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 OR2L2Q8NH16 312 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SLC30A5Q8TAD4 765 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 FAM57AQ8TBR7 257 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 MIEF2Q96C03 454 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SCMH1Q96GD3 660 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 RAX2Q96IS3 184 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 RBM41Q96IZ5 413 aaKnown RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF354BQ96LW1 612 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SMIM14Q96QK8 99 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 UTP23Q9BRU9 249 aaKnown RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 TRIM51Q9BSJ1 452 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SNRNP25Q9BV90 132 aaKnown RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SGPP1Q9BX95 441 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 STK33Q9BYT3 514 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 GPR63Q9BZJ6 419 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 PITHD1Q9GZP4 211 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 VPS16Q9H269 839 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 DEF6Q9H4E7 631 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SIX2Q9NPC8 291 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 LUC7LQ9NQ29 371 aaKnown RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 SLC22A11Q9NSA0 550 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF282Q9UDV7 671 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 GNPTGQ9UJJ9 305 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 C3orf18Q9UK00 162 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ADAM21Q9UKJ8 722 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 TTLL3Q9Y4R7 772 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ALG6Q9Y672 507 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 RP1L1Q8IWN7 2480 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-220ENST00000544550 NAV3Q8IVL0 2385 aa3.87□□□□□ -1.79
SNHG1-220ENST00000544550 ARHGEF17Q96PE2 2063 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 IGHV1-45A0A0A0MS14 117 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 A0A0A6YYJ9 748 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 OR2AG2A6NM03 316 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 F8VZ95 297 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 H7C1Q1 480 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MATN3O15232 486 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PRPF4O43172 522 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SLC4A1P02730 911 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 LPLP06858 475 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MTHFD2P13995 350 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PVRP15151 417 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MSH3P20585 1137 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PSMA2P25787 234 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 AKT1P31749 480 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SHMT2P34897 504 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MTIF2P46199 727 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ZFP36L2P47974 494 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 GABRA4P48169 554 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CD151P48509 253 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 EMP2P54851 167 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 IL13RA1P78552 427 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SRSF2Q01130 221 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 FMO1Q01740 532 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 DSC2Q02487 901 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PTP4A2Q12974 167 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 TRIM25Q14258 630 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 OR1C1Q15619 314 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 DPYSL2Q16555 572 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CA9Q16790 459 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MEP1AQ16819 746 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SLC25A35Q3KQZ1 300 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 FLYWCH1Q4VC44 716 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ATP13A5Q4VNC0 1218 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 KHDC1Q4VXA5 237 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 TOR2AQ5JU69 321 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 KLHDC7AQ5VTJ3 777 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 NXNQ6DKJ4 435 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PRMT9Q6P2P2 845 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 KDELC1Q6UW63 502 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SHISA6Q6ZSJ9 500 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 NEK10Q6ZWH5 1172 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 COX15Q7KZN9 410 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 STK32CQ86UX6 486 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ELOA2Q8IYF1 753 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ADGRF3Q8IZF5 1079 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 DNAJC22Q8N4W6 341 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 RASGEF1AQ8N9B8 481 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 POGLUT1Q8NBL1 392 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 DDHD1Q8NEL9 900 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms