RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 PGM1P36871 562 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 NUDT2P50583 147 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 RAB28P51157 221 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 DIO3P55073 304 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 NME5P56597 212 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 RPL38P63173 70 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 PHEXP78562 749 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 HMGCS1Q01581 520 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 CSTF3Q12996 717 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 EIF2B5Q13144 721 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 ART3Q13508 389 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 DDX39BQ13838 428 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 FZD2Q14332 565 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 MMEL1Q495T6 779 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 PDCD4Q53EL6 469 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 CACHD1Q5VU97 1274 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 IL23RQ5VWK5 629 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 PAOXQ6QHF9 649 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 GK5Q6ZS86 529 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 PARGQ86W56 976 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 C17orf64Q86WR6 236 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 ZFAND4Q86XD8 727 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 KRT78Q8N1N4 520 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 MFSD2AQ8NA29 543 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 CCL4L1Q8NHW4 92 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 UBE2E3Q969T4 207 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 HSPA12BQ96MM6 686 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 ORAI3Q9BRQ5 295 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 SLC25A23Q9BV35 468 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 ACAT2Q9BWD1 397 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 CADM1Q9BY67 442 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 MRPL1Q9BYD6 325 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 ACPTQ9BZG2 426 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 MIR1-1HGQ9H1L0 117 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 KIR3DX1Q9H7L2 352 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 SDR39U1Q9NRG7 319 aaPredicted RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 C1orf109Q9NX04 203 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 NDE1Q9NXR1 346 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 TAC3Q9UHF0 121 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 PCOLCE2Q9UKZ9 415 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 CCL27Q9Y4X3 112 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 GPR45Q9Y5Y3 372 aa9.66□□□□□ -0.86
MDH1-216ENST00000544381 HELZ2Q9BYK8 2649 aaKnown RBP9.66□□□□□ -0.86
MDH1-216ENST00000544381 NR5A2O00482 541 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 SLC22A3O75751 556 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CAPNS1P04632 268 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CDH1P12830 882 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 HSD3B1P14060 373 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CD22P20273 847 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 BCKDHBP21953 392 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CXCR2P25025 360 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 HSD3B2P26439 372 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 MAPK1P28482 360 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 PKLRP30613 574 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 MRPL19P49406 292 aaKnown RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 KCNK10P57789 538 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 RACK1P63244 317 aaKnown RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 SLC25A3Q00325 362 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 ACACAQ13085 2346 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.86
MDH1-216ENST00000544381 RFTN2Q52LD8 501 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 CRTC2Q53ET0 693 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 ZNF542PQ5EBM4 170 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CATSPEREQ5SY80 951 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 C10orf62Q5T681 223 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 C16orf89Q6UX73 402 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 TAF8Q7Z7C8 310 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 TRIM48Q8IWZ4 208 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 KYQ8NBH2 561 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 OR7G3Q8NG95 312 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 OR52E1Q8NGJ3 308 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 OR9I1Q8NGQ6 314 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 OR2L8Q8NGY9 312 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 FBXO27Q8NI29 283 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 HMGCLL1Q8TB92 370 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 WDR20Q8TBZ3 569 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 GPBAR1Q8TDU6 330 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 LCN9Q8WX39 176 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 RCN3Q96D15 328 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 WDR34Q96EX3 536 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 CMTM7Q96FZ5 175 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 MTERF1Q99551 399 aaKnown RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 MENTQ9BUN1 341 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 SCNM1Q9BWG6 230 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 BRINP2Q9C0B6 783 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 MMADHCQ9H3L0 296 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 XKR8Q9H6D3 395 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 PELI2Q9HAT8 420 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 BRF2Q9HAW0 419 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 SLC40A1Q9NP59 571 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 TMEM45AQ9NWC5 275 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 NMRK1Q9NWW6 199 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 ZIM2Q9NZV7 527 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 KLF15Q9UIH9 416 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 PNMA8BQ9ULN7 279 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 SH2B3Q9UQQ2 575 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.86
MDH1-216ENST00000544381 LRP4O75096 1905 aa9.65□□□□□ -0.86
MDH1-216ENST00000544381 TRBV23OR9-2A0A075B6M9 112 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms