RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 PDLIM5Q96HC4 596 aaKnown RBP10.14□□□□□ -0.79
CHEK1-218ENST00000544373 TSNARE1Q96NA8 513 aa10.14□□□□□ -0.79
CHEK1-218ENST00000544373 ILKAPQ9H0C8 392 aaPredicted RBP10.14□□□□□ -0.79
CHEK1-218ENST00000544373 MTO1Q9Y2Z2 717 aaKnown RBP10.14□□□□□ -0.79
CHEK1-218ENST00000544373 PCM1Q15154 2024 aa10.14□□□□□ -0.79
CHEK1-218ENST00000544373 POLEQ07864 2286 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 IGHV1-45A0A0A0MS14 117 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 NSG1A0A0A6YYJ2 146 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 IGHV3-20A0A0C4DH32 117 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PRPF4O43172 522 aaKnown RBP eCLIP10.13□□□□□ -0.794e-7■■■■□ 19.3
CHEK1-218ENST00000544373 SEMA7AO75326 666 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 NSA2O95478 260 aaKnown RBP10.13□□□□□ -0.79
CHEK1-218ENST00000544373 B3GALT4O96024 378 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PRR35P0CG20 571 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 RNF224P0DH78 156 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 CCND1P24385 295 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 AVPR1BP47901 424 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 CCR8P51685 355 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 AP1S2P56377 157 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PCOLCEQ15113 449 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 NDUFA9Q16795 377 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 LANCL3Q6ZV70 420 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 MFSD9Q8NBP5 474 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 CATSPER1Q8NEC5 780 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 OR5T3Q8NGG3 340 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 OR51Q1Q8NH59 317 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 DNAJB14Q8TBM8 379 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 BRIX1Q8TDN6 353 aaKnown RBP10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PYROXD1Q8WU10 500 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 TM9SF4Q92544 642 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 NEIL2Q969S2 332 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 THAP11Q96EK4 314 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 WDR77Q9BQA1 342 aaPredicted RBP10.13□□□□□ -0.79
CHEK1-218ENST00000544373 HAUS8Q9BT25 410 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 VN1R1Q9GZP7 353 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 CAB39LQ9H9S4 337 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 SAYSD1Q9NPB0 183 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 C14orf105Q9NVL8 296 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PLA2G3Q9NZ20 509 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 WHRNQ9P202 907 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
CHEK1-218ENST00000544373 ESPL1Q14674 2120 aa10.13□□□□□ -0.79
CHEK1-218ENST00000544373 DOCK10Q96BY6 2186 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 A0A1W2PQ72 361 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 FAM187AA6NFU0 413 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ZNF860A6NHJ4 632 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 H0YIG0 161 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 OR1F1O43749 312 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 KLHL41O60662 606 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 RDH16O75452 317 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CBX6O95503 412 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 C1QAP02745 245 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ENO2P09104 434 aaPredicted RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CXCR2P25025 360 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 GMPRP36959 345 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 XCR1P46094 333 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 GLRBP48167 497 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 GPX6P59796 221 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 NR6A1Q15406 480 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 TSNQ15631 228 aaKnown RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 IRAK1BP1Q5VVH5 260 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 TMEM205Q6UW68 189 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ISLR2Q6UXK2 745 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 KBTBD2Q8IY47 623 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 NKAPQ8N5F7 415 aaKnown RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SIRT6Q8N6T7 355 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CAMKVQ8NCB2 501 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 VPS39Q96JC1 886 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CNDP1Q96KN2 507 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 PSMG3-AS1Q96PY0 264 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 TRIM54Q9BYV2 358 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 RHOJQ9H4E5 214 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 PTGFRNQ9P2B2 879 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SLC22A14Q9Y267 594 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 NAALAD2Q9Y3Q0 740 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ICE1Q9Y2F5 2266 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 TEX15Q9BXT5 2789 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 LOC102723996A0A087X1L8 192 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 TCRBV9S1A1TA0A576 114 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 NDUFS4O43181 175 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 WISP3O95389 354 aaPredicted RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 F10P00742 488 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SERPINA7P05543 415 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SERPIND1P05546 499 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 C8orf89P0DMQ9 161 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ITGAMP11215 1152 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CASQ1P31415 396 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 GRK3P35626 688 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 SOX11P35716 441 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 GDF5P43026 501 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 PLTPP55058 493 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 ETF1P62495 437 aaKnown RBP10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CALCOCO2Q13137 446 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 CSHL1Q14406 222 aa10.12□□□□□ -0.79
CHEK1-218ENST00000544373 MINDY4Q4G0A6 757 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 337.7 ms