RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 CXXC4Q9H2H0 198 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 CDCP1Q9H5V8 836 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 LANCL2Q9NS86 450 aa14.54□□□□□ -0.08
CD4-212ENST00000544344 PACSIN2Q9UNF0 486 aaPredicted RBP14.54□□□□□ -0.08
CD4-212ENST00000544344 KCNE1BA0A087WTH5 132 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 A0A1B0GTH9 108 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 SMAPO00193 183 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 MSX1P28360 303 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 TPP2P29144 1249 aaPredicted RBP14.53□□□□□ -0.08
CD4-212ENST00000544344 STIP1P31948 543 aaKnown RBP14.53□□□□□ -0.08
CD4-212ENST00000544344 HSD17B2P37059 387 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 SLC26A5P58743 744 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 CEP128Q6ZU80 1094 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 ADCK2Q7Z695 626 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 CD163Q86VB7 1156 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 EID3Q8N140 333 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 RPRMLQ8N4K4 120 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 TSLPQ969D9 159 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 LPAR4Q99677 370 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 RAB6BQ9NRW1 208 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 FAM114A2Q9NRY5 505 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 RNF6Q9Y252 685 aa14.53□□□□□ -0.08
CD4-212ENST00000544344 PHF3Q92576 2039 aaKnown RBP14.53□□□□□ -0.08
CD4-212ENST00000544344 ABCA4P78363 2273 aa14.52□□□□□ -0.08
CD4-212ENST00000544344 E7EVH7 732 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 CDK2AP1O14519 115 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 LIASO43766 372 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 PTMAP06454 111 aaKnown RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 APRTP07741 180 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 PTGS2P35354 604 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 NAP1L1P55209 391 aaKnown RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 SESN2P58004 480 aaPredicted RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 ABRAXAS2Q15018 415 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 NSDHLQ15738 373 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 RPS19BP1Q86WX3 136 aaKnown RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 TGIF2LYQ8IUE0 185 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 REXO1L1PQ8IX06 675 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 KCT2Q8NC54 265 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 FBXO15Q8NCQ5 510 aaPredicted RBP14.52□□□□□ -0.09
CD4-212ENST00000544344 SLC30A3Q99726 388 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 RBCK1Q9BYM8 510 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 ABCF3Q9NUQ8 709 aa14.52□□□□□ -0.09
CD4-212ENST00000544344 ZNF407Q9C0G0 2248 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 FAM90A27PA6NNH2 459 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 MAGEB17A8MXT2 336 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 FOXO6A8MYZ6 492 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 GOLGA8KD6RF30 607 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 GOLGA8TH3BQL2 631 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 NDC80O14777 642 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 KIF5CO60282 957 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 RDH16O75452 317 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 CDC123O75794 336 aaPredicted RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 IFNB1P01574 187 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 ESR1P03372 595 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 CATP04040 527 aaKnown RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 TPOP07202 933 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 HOXD4P09016 255 aaPredicted RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 CHRNB4P30926 498 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 CYLC1P35663 651 aaPredicted RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 CLCN7P51798 805 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 NR0B1P51843 470 aaKnown RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 TAS2R50P59544 299 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 CMPK2Q5EBM0 449 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 EMC4Q5J8M3 183 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 GIMAP7Q8NHV1 300 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 MCOLN3Q8TDD5 553 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 ASB5Q8WWX0 329 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 MFSD3Q96ES6 412 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 EBNA1BP2Q99848 306 aaKnown RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 FOXC2Q99958 501 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 ZNF559Q9BR84 538 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 PLSCR2Q9NRY7 297 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 TMEM184CQ9NVA4 438 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 KCNN3Q9UGI6 736 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 AMFRQ9UKV5 643 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 SH2B3Q9UQQ2 575 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 CRYL1Q9Y2S2 319 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 EPN1Q9Y6I3 576 aaPredicted RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 DNAJC13O75165 2243 aa14.51□□□□□ -0.09
CD4-212ENST00000544344 FLNAP21333 2647 aaKnown RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 HRNRQ86YZ3 2850 aaPredicted RBP14.51□□□□□ -0.09
CD4-212ENST00000544344 ZNF839A8K0R7 811 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 H3BMM5 538 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 GFYI3L273 518 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 DNAJB6O75190 326 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 VAPBO95292 243 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 CHRM3P20309 590 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 IMPA1P29218 277 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 TRHRP34981 398 aaPredicted RBP14.5□□□□□ -0.09
CD4-212ENST00000544344 RFC3P40938 356 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 SKIV2L2P42285 1042 aaKnown RBP14.5□□□□□ -0.09
CD4-212ENST00000544344 CYB561P49447 251 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 ITGA8P53708 1063 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 MLF1P58340 268 aa14.5□□□□□ -0.09
CD4-212ENST00000544344 RPS15AP62244 130 aaKnown RBP14.5□□□□□ -0.09
CD4-212ENST00000544344 ACTN3Q08043 901 aaPredicted RBP14.5□□□□□ -0.09
CD4-212ENST00000544344 CES3Q6UWW8 571 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms