RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MAP2K4P45985 399 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 GSK3BP49841 420 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 HERV-K104P61576 105 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 OLIG2Q13516 323 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 SIRPB2Q5JXA9 342 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 GARNL3Q5VVW2 1013 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 SNX27Q96L92 541 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 ACBD6Q9BR61 282 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 NOCTQ9UK39 431 aaKnown RBP15.01□□□□□ -0.01
CHD4-210ENST00000544040 RIPK3Q9Y572 518 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 A0A1W2PPW3 197 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 GABRDO14764 452 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 GSTT2P0CG29 244 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 BCKDHAP12694 445 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 HNRNPDQ14103 355 aaKnown RBP15.01□□□□□ -0.01
CHD4-210ENST00000544040 MFSD8Q8NHS3 518 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 BORCS8Q96FH0 119 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 TSSK6Q9BXA6 273 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 PCDHA2Q9Y5H9 948 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 M0QX08 132 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 HLA-DPB1P04440 258 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 OR1E2P47887 323 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 NKAPLQ5M9Q1 402 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 VARS2Q5ST30 1063 aaKnown RBP15.01□□□□□ -0.01
CHD4-210ENST00000544040 PRAMEF14Q5SWL7 426 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 PRAMEF13Q5VWM6 474 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 GOLGA7Q7Z5G4 137 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 ORAI3Q9BRQ5 295 aa15.01□□□□□ -0.01
CHD4-210ENST00000544040 CARS2Q9HA77 564 aaKnown RBP15.01□□□□□ -0.01
CHD4-210ENST00000544040 A0A1B0GV50 99 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TOXO94900 526 aa15□□□□□ -0.01
CHD4-210ENST00000544040 BMP8BP34820 402 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ASPAP45381 313 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ARSJQ5FYB0 599 aaPredicted RBP15□□□□□ -0.01
CHD4-210ENST00000544040 BMP8AQ7Z5Y6 402 aa15□□□□□ -0.01
CHD4-210ENST00000544040 SLC6A7Q99884 636 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TMEM185BQ9H7F4 350 aa15□□□□□ -0.01
CHD4-210ENST00000544040 KLRF1Q9NZS2 232 aa15□□□□□ -0.01
CHD4-210ENST00000544040 IL36AQ9UHA7 158 aa15□□□□□ -0.01
CHD4-210ENST00000544040 CDK6Q00534 326 aa15□□□□□ -0.01
CHD4-210ENST00000544040 SAMD14Q8IZD0 417 aaPredicted RBP15□□□□□ -0.01
CHD4-210ENST00000544040 PLA2G15Q8NCC3 412 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TCEAL3Q969E4 200 aa15□□□□□ -0.01
CHD4-210ENST00000544040 GRHPRQ9UBQ7 328 aa15□□□□□ -0.01
CHD4-210ENST00000544040 LAMP5Q9UJQ1 280 aa15□□□□□ -0.01
CHD4-210ENST00000544040 RCBTB2O95199 551 aa15□□□□□ -0.01
CHD4-210ENST00000544040 LILRA4P59901 499 aa15□□□□□ -0.01
CHD4-210ENST00000544040 OR4F6Q8NGB9 312 aa15□□□□□ -0.01
CHD4-210ENST00000544040 CYB5D2Q8WUJ1 264 aa15□□□□□ -0.01
CHD4-210ENST00000544040 SMARCD2Q92925 531 aa15□□□□□ -0.01
CHD4-210ENST00000544040 EIF5A2Q9GZV4 153 aaKnown RBP15□□□□□ -0.01
CHD4-210ENST00000544040 TRIM64BA6NI03 449 aa15□□□□□ -0.01
CHD4-210ENST00000544040 CREG1O75629 220 aa15□□□□□ -0.01
CHD4-210ENST00000544040 SOX2P48431 317 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TUBA1BP68363 451 aa15□□□□□ -0.01
CHD4-210ENST00000544040 RABL3Q5HYI8 236 aa15□□□□□ -0.01
CHD4-210ENST00000544040 LRRC66Q68CR7 880 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TUBA1AQ71U36 451 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TM9SF3Q9HD45 589 aa15□□□□□ -0.01
CHD4-210ENST00000544040 PXDNQ92626 1479 aa15□□□□□ -0.01
CHD4-210ENST00000544040 HTR3EA5X5Y0 456 aa15□□□□□ -0.01
CHD4-210ENST00000544040 LOC730098B7Z3J9 87 aa15□□□□□ -0.01
CHD4-210ENST00000544040 TRAPPC6AO75865 159 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ARL6IP5O75915 188 aa15□□□□□ -0.01
CHD4-210ENST00000544040 SELPP16109 830 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ARL2P36404 184 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ACTR1BP42025 376 aa15□□□□□ -0.01
CHD4-210ENST00000544040 ACTR1AP61163 376 aa15□□□□□ -0.01
CHD4-210ENST00000544040 COL9A3Q14050 684 aaPredicted RBP15□□□□□ -0.01
CHD4-210ENST00000544040 FKBP1CQ5VVH2 108 aa15□□□□□ -0.01
CHD4-210ENST00000544040 BRF2Q9HAW0 419 aa15□□□□□ -0.01
CHD4-210ENST00000544040 GIMAP2Q9UG22 337 aa15□□□□□ -0.01
CHD4-210ENST00000544040 UBQLN2Q9UHD9 624 aa15□□□□□ -0.01
CHD4-210ENST00000544040 A0A1W2PPL8 197 aa15□□□□□ -0.01
CHD4-210ENST00000544040 C12orf71A8MTZ7 269 aa15□□□□□ -0.01
CHD4-210ENST00000544040 MUSKO15146 869 aa15□□□□□ -0.01
CHD4-210ENST00000544040 G6PDP11413 515 aa15□□□□□ -0.01
CHD4-210ENST00000544040 CKMT1AP12532 417 aa15□□□□□ -0.01
CHD4-210ENST00000544040 MATN1P21941 496 aa15□□□□□ -0.01
CHD4-210ENST00000544040 RPL10P27635 214 aaKnown RBP15□□□□□ -0.01
CHD4-210ENST00000544040 GNRHRP30968 328 aa15□□□□□ -0.01
CHD4-210ENST00000544040 PON3Q15166 354 aa15□□□□□ -0.01
CHD4-210ENST00000544040 THOC6Q86W42 341 aaKnown RBP15□□□□□ -0.01
CHD4-210ENST00000544040 RASGRP3Q8IV61 690 aa15□□□□□ -0.01
CHD4-210ENST00000544040 NAT8LQ8N9F0 302 aa15□□□□□ -0.01
CHD4-210ENST00000544040 PEX13Q92968 403 aa15□□□□□ -0.01
CHD4-210ENST00000544040 MYOCOSA0A1B0GUC4 107 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 C6orf47O95873 294 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 ZNF182P17025 639 aaPredicted RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 SPIN4Q56A73 249 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 CARD16Q5EG05 197 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 SLC29A4Q7RTT9 530 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 CCDC28AQ8IWP9 274 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 FCAMRQ8WWV6 532 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 OTUB2Q96DC9 234 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 EEF1E1O43324 174 aaKnown RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 PLATP00750 562 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 GLP1RP43220 463 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 TAS2R50P59544 299 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms