RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 HTR1EP28566 365 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 TAS2R50P59544 299 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 CSNK1G2P78368 415 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 PMP22Q01453 160 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 SRSF11Q05519 484 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 FCRLBQ6BAA4 426 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 CAPN13Q6MZZ7 669 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 BNC2Q6ZN30 1099 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 MYO1HQ8N1T3 1032 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 SLC5A8Q8N695 610 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 HORMAD2Q8N7B1 307 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 M1APQ8TC57 530 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 SLC13A3Q8WWT9 602 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 MAGED4Q96JG8 741 aa16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 AARSD1Q9BTE6 412 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-210ENST00000542876 FEZF1A0PJY2 475 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 FAM227AF5H4B4 570 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 HIST1H2AGP0C0S8 130 aaPredicted RBP16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 CD46P15529 392 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 HIST1H2ADP20671 130 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 GRNP28799 593 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 MPP1Q00013 466 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 SP140Q13342 867 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 TUBA3CQ13748 450 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 ABRAXAS2Q15018 415 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 NSDHLQ15738 373 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 HSP90AA5PQ58FG0 334 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 H3F3CQ6NXT2 135 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 TTC27Q6P3X3 843 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 TUBA3EQ6PEY2 450 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 XKRXQ6PP77 449 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 AGTRAPQ6RW13 159 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 GDF7Q7Z4P5 450 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 PCGF5Q86SE9 256 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 SLC26A11Q86WA9 606 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 AMER2Q8N7J2 671 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 TMEM178AQ8NBL3 297 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 HIST1H2AHQ96KK5 128 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 LPAR4Q99677 370 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 HIST1H2AJQ99878 128 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 H2AFJQ9BTM1 129 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 ATG10Q9H0Y0 220 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 PARVBQ9HBI1 364 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 MMP25Q9NPA2 562 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 KLHL1Q9NR64 748 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 IARS2Q9NSE4 1012 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 TAS2R13Q9NYV9 303 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 NAALAD2Q9Y3Q0 740 aa16.42■□□□□ 0.22
PPP1CA-210ENST00000542876 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SLC16A5O15375 505 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 RDH16O75452 317 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 COX6B1P14854 86 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 PTGER4P35408 488 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 COILP38432 576 aaPredicted RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SMSP52788 366 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SNRPNP63162 240 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SKP1P63208 163 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 ALDH6A1Q02252 535 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 OC90Q02509 493 aaPredicted RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 NAE1Q13564 534 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 HERC3Q15034 1050 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 OR1C1Q15619 314 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 ZNF630Q2M218 657 aaPredicted RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 KRTCAP3Q53RY4 240 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SFT2D3Q587I9 215 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 MYO7BQ6PIF6 2116 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 CRLF3Q8IUI8 442 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SPNS2Q8IVW8 549 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 TBC1D19Q8N5T2 526 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 KCT2Q8NC54 265 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 FAM98AQ8NCA5 519 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 THAP3Q8WTV1 239 aaPredicted RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 EEF1AKMT1Q8WVE0 214 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 TM4SF19Q96DZ7 209 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 PEX11GQ96HA9 241 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 OR1F2PQ96R84 312 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 NAP1L3Q99457 506 aaPredicted RBP16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 HAUS8Q9BT25 410 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 ANKRD10Q9NXR5 420 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 ADAMTS6Q9UKP5 1117 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 PDE10AQ9Y233 779 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 SLC22A7Q9Y694 548 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 HEATR5BQ9P2D3 2071 aa16.41■□□□□ 0.22
PPP1CA-210ENST00000542876 CDC123O75794 336 aaPredicted RBP16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 CDH1P12830 882 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 CD96P40200 585 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 ZXDCQ2QGD7 858 aaPredicted RBP16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 NIPAL1Q6NVV3 410 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 CCDC137Q6PK04 289 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 LCTLQ6UWM7 567 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 MFSD9Q8NBP5 474 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 MDS2Q8NDY4 140 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 PLPP5Q8NEB5 264 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 SIGLEC12Q96PQ1 595 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 NDNQ99608 321 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 RBCK1Q9BYM8 510 aa16.4■□□□□ 0.22
PPP1CA-210ENST00000542876 ZNF860A6NHJ4 632 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms