RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ING2Q9H160 280 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 NUDT4Q9NZJ9 180 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 CD274Q9NZQ7 290 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 ZNF282Q9UDV7 671 aaPredicted RBP16.04■□□□□ 0.16
CD9-209ENST00000540891 NXT1Q9UKK6 140 aaKnown RBP16.04■□□□□ 0.16
CD9-209ENST00000540891 PIEZO2Q9H5I5 2752 aa16.04■□□□□ 0.16
CD9-209ENST00000540891 KALRNO60229 2985 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 STK16O75716 305 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 IPO13O94829 963 aaKnown RBP16.03■□□□□ 0.16
CD9-209ENST00000540891 KLHL2O95198 593 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 ZGLP1P0C6A0 271 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 C1GALT1C1LP0DN25 315 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 IL1RNP18510 177 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 GNAZP19086 355 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 MMP11P24347 488 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 AHRP35869 848 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 MAT1AQ00266 395 aaKnown RBP16.03■□□□□ 0.16
CD9-209ENST00000540891 KLC1Q07866 573 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 NFATC3Q12968 1075 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 ACAP2Q15057 778 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 NDUFA9Q16795 377 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 PDSS2Q86YH6 399 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 RHEBL1Q8TAI7 183 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 ZCCHC10Q8TBK6 192 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 NT5CQ8TCD5 201 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 AIF1LQ9BQI0 150 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 MESP1Q9BRJ9 268 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 VPS11Q9H270 941 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 CNOT10Q9H9A5 744 aaKnown RBP16.03■□□□□ 0.16
CD9-209ENST00000540891 DNAJC11Q9NVH1 559 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 ZNF358Q9NW07 568 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 P4HTMQ9NXG6 502 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 GPRC5BQ9NZH0 403 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 ZFP69BQ9UJL9 534 aa16.03■□□□□ 0.16
CD9-209ENST00000540891 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SUPT3HB4E1H0 165 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 TRIM49D1C9J1S8 452 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 H0YIG0 161 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 MASP2O00187 686 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SOCS6O14544 535 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 NDUFS4O43181 175 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SUPT3HO75486 399 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 CEACAM4O75871 244 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 NSA2O95478 260 aaKnown RBP16.02■□□□□ 0.16
CD9-209ENST00000540891 PDGFAP04085 211 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SLC35G6P0C7Q6 338 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 NR1D1P20393 614 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 CNTFP26441 200 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 TNFRSF8P28908 595 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 AGTR2P50052 363 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 EFNA3P52797 238 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 OCA2Q04671 838 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 C19orf57Q0VDD7 668 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 HYAL2Q12891 473 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 PWP1Q13610 501 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SLC29A2Q14542 456 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 FAM83EQ2M2I3 478 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 ATG9BQ674R7 924 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 MED25Q71SY5 747 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 LAPTM4BQ86VI4 370 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 PRSS58Q8IYP2 241 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 AFAP1L2Q8N4X5 818 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 TMEM102Q8N9M5 508 aaPredicted RBP16.02■□□□□ 0.16
CD9-209ENST00000540891 C9orf43Q8TAL5 461 aaPredicted RBP16.02■□□□□ 0.16
CD9-209ENST00000540891 UBTD2Q8WUN7 234 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 MIEF2Q96C03 454 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 IP6K3Q96PC2 410 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 CD244Q9BZW8 370 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 AICDAQ9GZX7 198 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 ANKZF1Q9H8Y5 726 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 ZNF71Q9NQZ8 489 aaPredicted RBP16.02■□□□□ 0.16
CD9-209ENST00000540891 ACSS2Q9NR19 701 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 COPG2Q9UBF2 871 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 TRPC4Q9UBN4 977 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 TP53TG5Q9Y2B4 290 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 HS3ST3B1Q9Y662 390 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 SLC22A7Q9Y694 548 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
CD9-209ENST00000540891 BOD1L1Q8NFC6 3051 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 CCDC189A1A4V9 331 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 SGK494L7N484 410 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 MAP2K7O14733 419 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 PRPF4O43172 522 aaKnown RBP eCLIP16.01■□□□□ 0.15
CD9-209ENST00000540891 KLK8O60259 260 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 CCNT2O60583 730 aaKnown RBP16.01■□□□□ 0.15
CD9-209ENST00000540891 KRT38O76015 456 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
CD9-209ENST00000540891 CD22P20273 847 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 AVPR1BP47901 424 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 CCL11P51671 97 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 SLBPQ14493 270 aaKnown RBP eCLIP16.01■□□□□ 0.15
CD9-209ENST00000540891 RBBP5Q15291 538 aaKnown RBP16.01■□□□□ 0.15
CD9-209ENST00000540891 PDK4Q16654 411 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 TECRLQ5HYJ1 363 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 DCAF10Q5QP82 559 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 ADGRD1Q6QNK2 874 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 KIRREL2Q6UWL6 708 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 TAOK1Q7L7X3 1001 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 LRRC70Q7Z2Q7 622 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 ZC3H7AQ8IWR0 971 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms