RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MR1Q95460 341 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 L3HYPDHQ96EM0 354 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 NSUN5Q96P11 429 aaKnown RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 TMEM237Q96Q45 408 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 MACROD1Q9BQ69 325 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 PRM3Q9NNZ6 103 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 DHCR7Q9UBM7 475 aaKnown RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 RUVBL1Q9Y265 456 aaKnown RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 RAXQ9Y2V3 346 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 TAF4O00268 1085 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 DSCR3O14972 297 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 NDUFS4O43181 175 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 KLK10O43240 276 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 TRIM13O60858 407 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 MLYCDO95822 493 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 OTCP00480 354 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 TSPAN8P19075 237 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 CD22P20273 847 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 GSTM2P28161 218 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 RORAP35398 523 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 NAGLUP54802 743 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 NAA20P61599 178 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 RGS1Q08116 209 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 ASPHQ12797 758 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 GPS2Q13227 327 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 CLN3Q13286 438 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 COL9A2Q14055 689 aaPredicted RBP14.77□□□□□ -0.05
DDB1-218ENST00000540784 E2F2Q14209 437 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 GRHL2Q6ISB3 625 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 LRRC69Q6ZNQ3 347 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 RPS27LQ71UM5 84 aaKnown RBP14.77□□□□□ -0.05
DDB1-218ENST00000540784 C10orf107Q8IVU9 208 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 DSELQ8IZU8 1212 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 GOLGA6L1Q8N7Z2 621 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 PROKR1Q8TCW9 393 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 TRPC4APQ8TEL6 797 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 MOCOSQ96EN8 888 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 SEC16BQ96JE7 1060 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 DPH2Q9BQC3 489 aaPredicted RBP14.77□□□□□ -0.05
DDB1-218ENST00000540784 NTMT1Q9BV86 223 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 DRC3Q9H069 523 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 RHBGQ9H310 441 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 ZBTB26Q9HCK0 441 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 LHX9Q9NQ69 397 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 ACSS2Q9NR19 701 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 CDC14AQ9UNH5 594 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 RNF11Q9Y3C5 154 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 PCDHGA11Q9Y5H2 935 aa14.77□□□□□ -0.05
DDB1-218ENST00000540784 SNRNP200O75643 2136 aaKnown RBP14.77□□□□□ -0.05
DDB1-218ENST00000540784 CEP295Q9C0D2 2601 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 A0A1B0GX78 115 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 TM9SF1O15321 606 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 P2RX6O15547 441 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 PRPF4O43172 522 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDB1-218ENST00000540784 PIM1P11309 404 aaPredicted RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 PCNAP12004 261 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 TCN2P20062 427 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 ALDH3A1P30838 453 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 GCGRP47871 477 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 MAGOHP61326 146 aaKnown RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 CYP4F2P78329 520 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 CPSF6Q16630 551 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDB1-218ENST00000540784 AGBL2Q5U5Z8 902 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 LIPMQ5VYY2 423 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 FAM199XQ6PEV8 388 aaPredicted RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDB1-218ENST00000540784 L3MBTL4Q8NA19 623 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 KCT2Q8NC54 265 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 OR52B6Q8NGF0 335 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 NT5CQ8TCD5 201 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 CREB3L4Q8TEY5 395 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 SREK1Q8WXA9 508 aaKnown RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 CCT6BQ92526 530 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 REPS1Q96D71 796 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 MAGEB10Q96LZ2 347 aaPredicted RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 CNTNAP3BQ96NU0 1288 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 GBP5Q96PP8 586 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 CDK15Q96Q40 435 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 CNTNAP3Q9BZ76 1288 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 AKIRIN1Q9H9L7 192 aaPredicted RBP14.76□□□□□ -0.05
DDB1-218ENST00000540784 ADGRE2Q9UHX3 823 aa14.76□□□□□ -0.05
DDB1-218ENST00000540784 ADAMTS20P59510 1910 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 URADA6NGE7 173 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 PPP6CO00743 305 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 CLEC3AO75596 197 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 ZWINTO95229 277 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 SERPINA6P08185 405 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 SERPINB1P30740 379 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 STAT5AP42229 794 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 FAM53BQ14153 422 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 PCLAFQ15004 111 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 NKAIN1Q4KMZ8 207 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 TMEM214Q6NUQ4 689 aaKnown RBP14.75□□□□□ -0.05
DDB1-218ENST00000540784 PRMT9Q6P2P2 845 aa14.75□□□□□ -0.05
DDB1-218ENST00000540784 LAS2Q8IYD9 372 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms