RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 NAB1Q13506 487 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 PLEKHN1Q494U1 663 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 MINDY4Q4G0A6 757 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 VWA2Q5GFL6 755 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 TMEM214Q6NUQ4 689 aaKnown RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 TMEM205Q6UW68 189 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CLEC18BQ6UXF7 455 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CNPY4Q8N129 248 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 KRT78Q8N1N4 520 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 BCORP1Q8N888 145 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 AMER3Q8N944 861 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CLEC18CQ8NCF0 446 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 FBXO36Q8NEA4 188 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 OR4K1Q8NGD4 311 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 OR56A3Q8NH54 315 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ADAMTS18Q8TE60 1221 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 SSC4DQ8WTU2 575 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 SLC5A11Q8WWX8 675 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CPNE1Q99829 537 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 EGFL8Q99944 293 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ATG10Q9H0Y0 220 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF160Q9HCG1 818 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 GPAMQ9HCL2 828 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 MOCS1Q9NZB8 636 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CTNNAL1Q9UBT7 734 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ZFP69BQ9UJL9 534 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 PTPN13Q12923 2485 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 IGHV1-45A0A0A0MS14 117 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 FAM95CA0A1B0GW59 222 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ANKUB1A6NFN9 424 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 NDUFS4O43181 175 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 OR1F1O43749 312 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 PRR35P0CG20 571 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 COX6A1P12074 109 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 CDH1P12830 882 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 EDN3P14138 238 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 STX2P32856 288 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 SPRP35270 261 aaPredicted RBP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 XCR1P46094 333 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ATP6V0D1P61421 351 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ESPL1Q14674 2120 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 RBM20Q5T481 1227 aaKnown RBP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 SHISA6Q6ZSJ9 500 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ZC3HC1Q86WB0 502 aaKnown RBP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 PRSS58Q8IYP2 241 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 AGGF1Q8N302 714 aaeCLIP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ST6GALNAC3Q8NDV1 305 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 OR51Q1Q8NH59 317 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 HAS2Q92819 552 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
CDCA3-208ENST00000540683 TM4SF19Q96DZ7 209 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 FAR2Q96K12 515 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 CNDP1Q96KN2 507 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF354BQ96LW1 612 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 LPAR4Q99677 370 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 DERL2Q9GZP9 239 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 GPRC5BQ9NZH0 403 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 ADAMTS6Q9UKP5 1117 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 OARD1Q9Y530 152 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
CDCA3-208ENST00000540683 KRT87PA6NCN2 255 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 CLGNO14967 610 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 FOXS1O43638 330 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 GUCA1CO95843 209 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 TSPAN12O95859 305 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 TUBB4AP04350 444 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 CD46P15529 392 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 STMN1P16949 149 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 ALOX12P18054 663 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SAT1P21673 171 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 GNLYP22749 145 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 GABRB3P28472 473 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 RPL21P46778 160 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 LAPTM5Q13571 262 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 HIST2H2ACQ16777 129 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 PHKG1Q16816 387 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 PAGE2BQ5JRK9 111 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 PLAG1Q6DJT9 500 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 HIST2H2AA3Q6FI13 130 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 CPEB2Q7Z5Q1 589 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 ZC3H7AQ8IWR0 971 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 LGI4Q8N135 537 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 CISD2Q8N5K1 135 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SLC5A8Q8N695 610 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 Q8NA96 180 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 FAM98AQ8NCA5 519 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SRFBP1Q8NEF9 429 aaKnown RBP9.83□□□□□ -0.84
CDCA3-208ENST00000540683 SPATA4Q8NEY3 305 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 OR9A4Q8NGU2 314 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 DNAJB8Q8NHS0 232 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 M1APQ8TC57 530 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 NT5CQ8TCD5 201 aa9.83□□□□□ -0.84
CDCA3-208ENST00000540683 UBE2E3Q969T4 207 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms