RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TRIP11Q15643 1979 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 IFNA7P01567 189 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TCF3P15923 654 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CTRB1P17538 263 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ITGALP20701 1170 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 C4BPBP20851 252 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PXNP49023 591 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 DSTNP60981 165 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 MAXP61244 160 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ISL1P61371 349 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 HERVK_113P63132 956 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TARDBPQ13148 414 aaKnown RBP eCLIP8.41□□□□□ -1.06
DDB1-217ENST00000540166 HECTD2Q5U5R9 776 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CTRB2Q6GPI1 263 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 RASSF6Q6ZTQ3 369 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ADAMTSL2Q86TH1 951 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CACUL1Q86Y37 369 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 VWA5B2Q8N398 1253 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PNPLA1Q8N8W4 532 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ZNF431Q8TF32 576 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 DNAJA4Q8WW22 397 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 CENPIQ92674 756 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 C3orf30Q96M34 536 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 NEDD4LQ96PU5 975 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 KCNA7Q96RP8 456 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ERVK-6Q9BXR3 956 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 AMBRA1Q9C0C7 1298 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 RACGAP1Q9H0H5 632 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 GLOD4Q9HC38 313 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 DNAJC15Q9Y5T4 150 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 KIAA0513O60268 411 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TLR5O60602 858 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 DCTP40126 519 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 SLC11A2P49281 568 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 HTR4Q13639 388 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TECRLQ5HYJ1 363 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PAGE3Q5JUK9 113 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 IL27RAQ6UWB1 636 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ENPP6Q6UWR7 440 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 B3GNT8Q7Z7M8 397 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CRYBG2Q8N1P7 616 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 LPCAT1Q8NF37 534 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 OR10Q1Q8NGQ4 319 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CDC26Q8NHZ8 85 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PIGKQ92643 395 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ULK4Q96C45 1275 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 NPY6RQ99463 290 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 GTPBP2Q9BX10 602 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 MED28Q9H204 178 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 RNF121Q9H920 327 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PCDHA9Q9Y5H5 950 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 AXIN1O15169 862 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CAPN5O15484 640 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 GOT2P00505 430 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 PGRP06401 933 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TRAPPC2P0DI81 140 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TRAPPC2BP0DI82 140 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PSMA1P25786 263 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 POU1F1P28069 291 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ID4P47928 161 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ETV1P50549 477 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 RORCP51449 518 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 NUDT6P53370 316 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 UGT2B15P54855 530 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 DBPQ10586 325 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 LCP2Q13094 533 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 C1DQ13901 141 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 TSNQ15631 228 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 SMN1Q16637 294 aaKnown RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 EOGTQ5NDL2 527 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CLVS2Q5SYC1 327 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 BICRALQ6AI39 1079 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 BHLHB9Q6PI77 547 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ANGPTL8Q6UXH0 198 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CREB3L2Q70SY1 520 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 BMP8AQ7Z5Y6 402 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 SLC37A3Q8NCC5 494 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 OR56A4Q8NGH8 313 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 CLHC1Q8NHS4 586 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ZFAND1Q8TCF1 268 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PTERQ96BW5 349 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TTLL2Q9BWV7 592 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 OSBPL2Q9H1P3 480 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 OR51E2Q9H255 320 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 FAM124BQ9H5Z6 455 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 SMURF1Q9HCE7 757 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 SDR39U1Q9NRG7 319 aaPredicted RBP8.41□□□□□ -1.06
DDB1-217ENST00000540166 OSGIN1Q9UJX0 560 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 ADAM30Q9UKF2 790 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 TMPRSS11EQ9UL52 423 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 AP3M1Q9Y2T2 418 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 PCDHGB2Q9Y5G2 931 aa8.41□□□□□ -1.06
DDB1-217ENST00000540166 MATN4O95460 622 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 GNSP15586 552 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 WNT3AP56704 352 aa8.4□□□□□ -1.06
DDB1-217ENST00000540166 NHLH1Q02575 133 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms