RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MAGEB17A8MXT2 336 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TOX3O15405 576 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FTH1P19P0C7X4 201 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TROVE2P10155 538 aaKnown RBP eCLIP18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 AQP5P55064 265 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CYP4F2P78329 520 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 FRMPD2BQ6IN97 320 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RNF165Q6ZSG1 346 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ARHGAP22Q7Z5H3 698 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 DNAJC22Q8N4W6 341 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TBC1D19Q8N5T2 526 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 WDR48Q8TAF3 677 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 KLHL6Q8WZ60 621 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SLC41A2Q96JW4 573 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CCDC74BQ96LY2 380 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ELAC2Q9BQ52 826 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SCNM1Q9BWG6 230 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ZNF768Q9H5H4 540 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SOHLH2Q9NX45 425 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ZFP69BQ9UJL9 534 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 IGF2RP11717 2491 aa18.09■□□□□ 0.49
TNFRSF1A-213ENST00000540022 LOC105369274A0A096LPK9 316 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 LOC102723532A0A0G2JNH3 316 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ANKDD1BA6NHY2 528 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HYAL3O43820 417 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TBX6O95947 436 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 STATHP02808 62 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 ANKRD34CP0C6C1 535 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 AHRP35869 848 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PIK3CBP42338 1070 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 MLLT3P42568 568 aaPredicted RBP18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 GABRA4P48169 554 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 INHBCP55103 352 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 DEFB110Q30KQ9 67 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 SLC9B1Q4ZJI4 515 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 TRIM46Q7Z4K8 759 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 VN1R4Q7Z5H5 301 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 HOMEZQ8IX15 550 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 OR4N4Q8N0Y3 316 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RCBTB1Q8NDN9 531 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 OR2T11Q8NH01 316 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 C19orf60Q96EN9 201 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CCT8L2Q96SF2 557 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CHRNA10Q9GZZ6 450 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 MEAF6Q9HAF1 191 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PDE7BQ9NP56 450 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 DMRT3Q9NQL9 472 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 CCL27Q9Y4X3 112 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 PCDHGA1Q9Y5H4 931 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 AP1M2Q9Y6Q5 423 aa18.08■□□□□ 0.49
TNFRSF1A-213ENST00000540022 RP1P56715 2156 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 USP24Q9UPU5 2620 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ATP6AP2A0A1C7CYW4 349 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TRPC5OSA6NMA1 111 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SDHDO14521 159 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ATP6AP2O75787 350 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 DKK1O94907 266 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 NELFEP18615 380 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PDX1P52945 283 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 RPS13P62277 151 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HSD11B2P80365 405 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 E2F1Q01094 437 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 HMGCS1Q01581 520 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ZNF33BQ06732 778 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ZFP36L1Q07352 338 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 XKR7Q5GH72 579 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 C10orf62Q5T681 223 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 EPGNQ6UW88 154 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 DHRS13Q6UX07 377 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 Q6ZSR9 355 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 B3GNT8Q7Z7M8 397 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KMT5CQ86Y97 462 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TTLQ8NG68 377 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CREB3L4Q8TEY5 395 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 THAP11Q96EK4 314 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 EBF4Q9BQW3 602 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ACPTQ9BZG2 426 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 WDR55Q9H6Y2 383 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ADGRE2Q9UHX3 823 aa18.08■□□□□ 0.48
TNFRSF1A-213ENST00000540022 A0A0G2JND7 137 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SERTM1A2A2V5 107 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 H0YGG7 62 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 FOXE1O00358 373 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 SH3BGRLO75368 114 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ETHE1O95571 254 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 FAM107AO95990 144 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 TGFB1P01137 390 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 EPHA3P29320 983 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ARL4DP49703 201 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 IDH3AP50213 366 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ARF3P61204 181 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 INSM1Q01101 510 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 KCNAB1Q14722 419 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 ZC3H12BQ5HYM0 836 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 PHF19Q5T6S3 580 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MCATQ8IVS2 390 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 D2HGDHQ8N465 521 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 CCT6BQ92526 530 aa18.07■□□□□ 0.48
TNFRSF1A-213ENST00000540022 MAELQ96JY0 434 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms