RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR2A25A4D2G3 310 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SLC38A8A6NNN8 435 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 FAM220BPB1ANY3 271 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 HHLA1C9JL84 531 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 GNGT2O14610 69 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PRMT5O14744 637 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 BCKDKO14874 412 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ANKRD28O15084 1053 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 MUSKO15146 869 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 GSTA4O15217 222 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SEC22BO75396 215 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ERN1O75460 977 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 UGT2B17O75795 530 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 WDR47O94967 919 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ALX3O95076 343 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 MED26O95402 600 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 VNN2O95498 520 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 MT-CYBP00156 380 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 IL6P05231 212 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 LINC00032P0C843 101 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 NCK1P16333 377 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 IL7RP16871 459 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 HLA-DPA1P20036 260 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 DRD1P21728 446 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 BDNFP23560 247 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 DDX6P26196 483 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 AKT1P31749 480 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 CASP3P42574 277 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RPS5P46782 204 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PLK1P53350 603 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 UGT2B15P54855 530 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 TIAL1Q01085 375 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RAD51Q06609 339 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 CD300CQ08708 224 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 TRAF3Q13114 568 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SEMA3AQ14563 771 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KIAA0040Q15053 153 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SF3B4Q15427 424 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SMAD1Q15797 465 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PFKFB4Q16877 469 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 IMPG1Q17R60 797 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ATP6AP1LQ52LC2 224 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RUNDC3AQ59EK9 446 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF789Q5FWF6 425 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ARTNQ5T4W7 220 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KDM4DQ6B0I6 523 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 Q6ZS52 159 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 MSANTD1Q6ZTZ1 278 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 GPRIN3Q6ZVF9 776 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 GAREM2Q75VX8 874 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 BHLHA9Q7RTU4 235 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KDELC2Q7Z4H8 507 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 DNAJB7Q7Z6W7 309 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 OSTM1Q86WC4 334 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 IFNEQ86WN2 208 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 THNSL2Q86YJ6 484 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 LIX1LQ8IVB5 337 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 MICU2Q8IYU8 434 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SLC7A5P1Q8MH63 180 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RTL3Q8N8U3 475 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ZSCAN1Q8NBB4 408 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF548Q8NEK5 533 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 IL17RDQ8NFM7 739 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KBTBD8Q8NFY9 601 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 OR2T12Q8NG77 320 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 GRPEL2Q8TAA5 225 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 BRSK1Q8TDC3 778 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 CHTF18Q8WVB6 975 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 NANOS1Q8WY41 292 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PROX1Q92786 737 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RSPRY1Q96DX4 576 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ZHX1-C8orf76Q96EF9 292 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SLC47A1Q96FL8 570 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PYURFQ96I23 114 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 PITX2Q99697 317 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SMOQ99835 787 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 FAM83CQ9BQN1 747 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 DGCR6LQ9BY27 220 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SLC39A8Q9C0K1 460 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 TP63Q9H3D4 680 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SLA2Q9H6Q3 261 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SYNDIG1Q9H7V2 258 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ACOT13Q9NPJ3 140 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 SACM1LQ9NTJ5 587 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 TAS2R13Q9NYV9 303 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 CRNNQ9UBG3 495 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KLQ9UEF7 1012 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF229Q9UJW7 825 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 NDRG4Q9ULP0 352 aaKnown RBP7.41□□□□□ -1.22
CCDC60-204ENST00000539847 NEU3Q9UQ49 428 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 KLK4Q9Y5K2 254 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 DGKBQ9Y6T7 804 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 RALGAPA1Q6GYQ0 2036 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MTMR11A4FU01 709 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 EFCAB9A8MZ26 197 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 FAM25AB3EWG3 89 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms