RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RAB7BQ96AH8 199 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 SAMD11Q96NU1 681 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 HDAC8Q9BY41 377 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZDHHC5Q9C0B5 715 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 REEP4Q9H6H4 257 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 DMRT3Q9NQL9 472 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 TMEM9Q9P0T7 183 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ZNF282Q9UDV7 671 aaPredicted RBP17.25■□□□□ 0.35
GNE-204ENST00000539208 BLOC1S6Q9UL45 172 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 VPS4AQ9UN37 437 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 CDC14AQ9UNH5 594 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 ABCG2Q9UNQ0 655 aa17.25■□□□□ 0.35
GNE-204ENST00000539208 TCF20Q9UGU0 1960 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 PIPSLA2A3N6 862 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 EEF1B2P24534 225 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 DNAJA1P31689 397 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 POLR2IP36954 125 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 RPL3P39023 403 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 PIK3CBP42338 1070 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 TPD52P55327 224 aaPredicted RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 RGNQ15493 299 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 R3HCC1LQ7Z5L2 792 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 C11orf96Q7Z7L8 435 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 DSG4Q86SJ6 1040 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 C12orf76Q8N812 135 aaPredicted RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 OR13F1Q8NGS4 319 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 SNX19Q92543 992 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 ASPSCR1Q9BZE9 553 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 LIN28AQ9H9Z2 209 aaKnown RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 CCDC177Q9NQR7 707 aaPredicted RBP17.24■□□□□ 0.35
GNE-204ENST00000539208 ATAD3AQ9NVI7 634 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 OBP2AQ9NY56 170 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 SH2B3Q9UQQ2 575 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 U3KQV3 271 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 KIAA1549LQ6ZVL6 1849 aa17.24■□□□□ 0.35
GNE-204ENST00000539208 PLK4O00444 970 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 B4GAT1O43505 415 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 PI15O43692 258 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 CDK4P11802 303 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 FPR1P21462 350 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 GSTM2P28161 218 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 CD47Q08722 323 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 RPA4Q13156 261 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 STARD3Q14849 445 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 PDGFRLQ15198 375 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 CHST15Q7LFX5 561 aaPredicted RBP17.23■□□□□ 0.35
GNE-204ENST00000539208 COMMD6Q7Z4G1 85 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 PIK3C3Q8NEB9 887 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 COX14Q96I36 57 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 DPH2Q9BQC3 489 aaPredicted RBP17.23■□□□□ 0.35
GNE-204ENST00000539208 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 OR52A5Q9H2C5 316 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 ADNPQ9H2P0 1102 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 BAG5Q9UL15 447 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 KIAA0100Q14667 2235 aaKnown RBP17.23■□□□□ 0.35
GNE-204ENST00000539208 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
GNE-204ENST00000539208 UGT2B11O75310 529 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 SH3BGRLO75368 114 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 SEC14L2O76054 403 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 PCGF2P35227 344 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 PDE7AQ13946 482 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 CTU2Q2VPK5 515 aaKnown RBP17.23■□□□□ 0.35
GNE-204ENST00000539208 KDM4DQ6B0I6 523 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 TMC5Q6UXY8 1006 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 ADAMTSL4Q6UY14 1074 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 ARMCX6Q7L4S7 300 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 CXorf40AQ8TE69 158 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 HSH2DQ96JZ2 352 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 LTB4R2Q9NPC1 389 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
GNE-204ENST00000539208 C1QTNF3-AMACRE9PGA6 284 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 IGFBP5P24593 272 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 NFE2L1Q14494 772 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 C16orf72Q14CZ0 275 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 TEAD4Q15561 434 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 NEDD8Q15843 81 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MEP1AQ16819 746 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 AP1ARQ63HQ0 302 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 XAF1Q6GPH4 301 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 CYP4Z1Q86W10 505 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 METTL4Q8N3J2 472 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 RAD51AP1Q96B01 352 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MTERF3Q96E29 417 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 TRIT1Q9H3H1 467 aaKnown RBP17.22■□□□□ 0.35
GNE-204ENST00000539208 TRPV4Q9HBA0 871 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MYNNQ9NPC7 610 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 HSPE1-MOB4S4R3N1 261 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 PCM1Q15154 2024 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 MYO7AQ13402 2215 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 H3BMQ9 156 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 IL7RP16871 459 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 KELP23276 732 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 P2RY2P41231 377 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 ITGA1P56199 1179 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 PHEXP78562 749 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 VLDLRP98155 873 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 GAB1Q13480 694 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 IQCCQ4KMZ1 466 aa17.22■□□□□ 0.35
GNE-204ENST00000539208 GPR107Q5VW38 600 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms