RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 ANKRD26P1Q6NSI1 321 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 ENPP7Q6UWV6 458 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 VPS37AQ8NEZ2 397 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 OR4K1Q8NGD4 311 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 WDR48Q8TAF3 677 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 OR1E3Q8WZA6 343 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 FIG4Q92562 907 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 GATA6Q92908 595 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 COQ8BQ96D53 544 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 PRDM8Q9NQV8 689 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 ATP6V1HQ9UI12 483 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 BTNL2Q9UIR0 455 aa19.59■□□□□ 0.73
DDX55-205ENST00000538744 SZT2Q5T011 3432 aa19.58■□□□□ 0.73
DDX55-205ENST00000538744 CXCR6O00574 342 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 APBB3O95704 486 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 HTR1BP28222 390 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 RPL3P39023 403 aaKnown RBP19.58■□□□□ 0.72
DDX55-205ENST00000538744 GZMMP51124 257 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 LRRC74AQ0VAA2 488 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 OR52E4Q8NGH9 312 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.58■□□□□ 0.72
DDX55-205ENST00000538744 HMGB4Q8WW32 186 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 CENPNQ96H22 339 aaPredicted RBP19.58■□□□□ 0.72
DDX55-205ENST00000538744 BMFQ96LC9 184 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 CIB1Q99828 191 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 REEP4Q9H6H4 257 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 UBE2ZQ9H832 354 aaPredicted RBP19.58■□□□□ 0.72
DDX55-205ENST00000538744 MYNNQ9NPC7 610 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 AHSPQ9NZD4 102 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 CA5BQ9Y2D0 317 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 BTBD3Q9Y2F9 522 aa19.58■□□□□ 0.72
DDX55-205ENST00000538744 OR52A4PA6NMU1 304 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 DENRO43583 198 aaKnown RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 KDM1AO60341 852 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 SEMA3DO95025 777 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 EPN2O95208 641 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 CPSF4O95639 269 aaKnown RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 CD72P21854 359 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 AKT2P31751 481 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 ZNF621Q6ZSS3 439 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 R3HCC1LQ7Z5L2 792 aaKnown RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 CLECL1Q8IZS7 167 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 OR52E1Q8NGJ3 308 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 C16orf78Q8WTQ4 265 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 PDXPQ96GD0 296 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 REXO5Q96IC2 774 aaKnown RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 GAS2L1Q99501 681 aaPredicted RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 SEPHS2Q99611 448 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 BHLHE41Q9C0J9 482 aaPredicted RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 XKR8Q9H6D3 395 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 NDRG2Q9UN36 371 aaKnown RBP19.57■□□□□ 0.72
DDX55-205ENST00000538744 PCDHB11Q9Y5F2 797 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 MYO10Q9HD67 2058 aa19.57■□□□□ 0.72
DDX55-205ENST00000538744 EIF4E1BA6NMX2 242 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 H0Y8X5 98 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 H7BY64 318 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 CLIC1O00299 241 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 SCAMP1O15126 338 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 SEMA4FO95754 770 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 PRKCQQ04759 706 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 PRDX1Q06830 199 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 FAM98BQ52LJ0 330 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 TMEM31Q5JXX7 168 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 ZBTB49Q6ZSB9 765 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 SLC9B2Q86UD5 537 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 ANKRD53Q8N9V6 530 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 FAM162AQ96A26 154 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 RNF145Q96MT1 663 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 PRAP1Q96NZ9 151 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 CENPKQ9BS16 269 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 MS4A8Q9BY19 250 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 POLMQ9NP87 494 aaPredicted RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 SLC2A4RGQ9NR83 387 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 ATAD3AQ9NVI7 634 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 SH3BP4Q9P0V3 963 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 USP36Q9P275 1121 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 ICKQ9UPZ9 632 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 EXO1Q9UQ84 846 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 AP4B1Q9Y6B7 739 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 V9GYQ6 96 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 XIRP2A4UGR9 3374 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 TNFRSF10CO14798 259 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 YY2O15391 372 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 GBAP04062 536 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 KLK1P06870 262 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 UBTFL6P0CB48 400 aaPredicted RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 SRFP11831 508 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 CCT8P50990 548 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 ATP6AP1Q15904 470 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 NRF1Q16656 503 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 INTS11Q5TA45 600 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 KHDRBS2Q5VWX1 349 aaKnown RBP19.56■□□□□ 0.72
DDX55-205ENST00000538744 FAM71E1Q6IPT2 247 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 PACRGLQ8N7B6 248 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 NCLNQ969V3 563 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 ZNF597Q96LX8 424 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 PHF12Q96QT6 1004 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 UGT2B28Q9BY64 529 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 SCOCQ9UIL1 159 aa19.56■□□□□ 0.72
DDX55-205ENST00000538744 COLEC10Q9Y6Z7 277 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms