RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 NPIPB8E9PQR5 432 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 M0R129 80 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SLC22A1O15245 554 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SERPINB7O75635 380 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 IMPDH2P12268 514 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SLC7A9P82251 487 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CSTF3Q12996 717 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SP140Q13342 867 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RGNQ15493 299 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 INAQ16352 499 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CATSPEREQ5SY80 951 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 IER5LQ5T953 404 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 TMEM215Q68D42 235 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 NIPAL1Q6NVV3 410 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 FAHD1Q6P587 224 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 MSANTD1Q6ZTZ1 278 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 OTOP2Q7RTS6 562 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ADCK1Q86TW2 530 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 MFSD4AQ8N468 514 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 HUS1BQ8NHY5 278 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SPPL2AQ8TCT8 520 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 DYNC2LI1Q8TCX1 351 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ITFG2Q969R8 447 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 HERC2P3Q9BVR0 1158 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CPEB1Q9BZB8 566 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 GPATCH2Q9NW75 528 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 EXO1Q9UQ84 846 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SH2B3Q9UQQ2 575 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RNF6Q9Y252 685 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RUVBL1Q9Y265 456 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 PCM1Q15154 2024 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 TRAV19A0A0A6YYK7 116 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SUV39H1O43463 412 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 LEFTY1O75610 366 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 DNAJB5O75953 348 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ETFAP13804 333 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CD36P16671 472 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 WEE1P30291 646 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ST13P50502 369 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 NUDT6P53370 316 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RPS13P62277 151 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 OXA1LQ15070 435 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 MAPK11Q15759 364 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 FAM180BQ6P0A1 224 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ERICH5Q6P6B1 374 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RASGEF1AQ8N9B8 481 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 FEVQ99581 238 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 LINC00597Q9H2U6 94 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SLC25A13Q9UJS0 675 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ACSL6Q9UKU0 697 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SLC16A5O15375 505 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 SLCO2B1O94956 709 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 C9P02748 559 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 GSTM1P09488 218 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CTSAP10619 480 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 IDSP22304 550 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 IMPA1P29218 277 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 TGFBR2P37173 567 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 LIPAP38571 399 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CRATP43155 626 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CXCR4P61073 352 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 MC1RQ01726 317 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 SYTL3Q4VX76 610 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 RBM12BQ8IXT5 1001 aaKnown RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 RAVER1Q8IY67 606 aaKnown RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CLP1Q92989 425 aaKnown RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 NEIL2Q969S2 332 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 LGALS12Q96DT0 336 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 PKP4Q99569 1192 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 ZBTB20Q9HC78 741 aaPredicted RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 NECTIN3Q9NQS3 549 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 INIPQ9NRY2 104 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 ERVW-1Q9UQF0 538 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 HELZP42694 1942 aaKnown RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 DNAH14Q0VDD8 3507 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 OR2A25A4D2G3 310 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 TTC34A8MYJ7 566 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 GRM6O15303 877 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CCL16O15467 120 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 PAGE2Q7Z2X7 111 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 NPAS3Q8IXF0 933 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 OR4A15Q8NGL6 344 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CIDECQ96AQ7 238 aaPredicted RBP11.52□□□□□ -0.57
CPNE8-203ENST00000538596 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 SLC6A14Q9UN76 642 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 ITM2BQ9Y287 266 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 HSPE1-MOB4S4R3N1 261 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
CPNE8-203ENST00000538596 SERTM1A2A2V5 107 aa11.51□□□□□ -0.57
CPNE8-203ENST00000538596 MGAT4DA6NG13 374 aa11.51□□□□□ -0.57
CPNE8-203ENST00000538596 PRAMEF25A6NGN4 478 aa11.51□□□□□ -0.57
CPNE8-203ENST00000538596 PRMT3O60678 531 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms