RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 XKR5Q6UX68 686 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 GTF2IRD2Q86UP8 949 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 OR4A15Q8NGL6 344 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 HCAR2Q8TDS4 363 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 ARRDC3Q96B67 414 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 ASPSCR1Q9BZE9 553 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 BTNL2Q9UIR0 455 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 ANKRD33BA6NCL7 494 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 MMP20O60882 483 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 LILRB5O75023 590 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 ITGAMP11215 1152 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 RYKP34925 604 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 CRYBA2P53672 197 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 PCDH1Q08174 1060 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 RGNQ15493 299 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 FNDC3BQ53EP0 1204 aaKnown RBP23.97■■□□□ 1.43
RAB40C-204ENST00000538492 IER5LQ5T953 404 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 NAGSQ8N159 534 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 NUS1Q96E22 293 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 METTL2AQ96IZ6 378 aaKnown RBP23.97■■□□□ 1.43
RAB40C-204ENST00000538492 NODALQ96S42 347 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 GABARAPL1Q9H0R8 117 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 PREBQ9HCU5 417 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 RAPGEFL1Q9UHV5 662 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 SNX5Q9Y5X3 404 aa23.97■■□□□ 1.43
RAB40C-204ENST00000538492 NR4A1P22736 598 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 FMO3P31513 532 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 GJA8P48165 433 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 CLK3P49761 638 aaKnown RBP23.96■■□□□ 1.43
RAB40C-204ENST00000538492 CAMK1Q14012 370 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 KDM4DQ6B0I6 523 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 SFTPA1Q8IWL2 248 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 ZFP90Q8TF47 636 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 HSPBAP1Q96EW2 488 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 CSF3RQ99062 836 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 RAD9AQ99638 391 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 OR51B5Q9H339 312 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 TRIT1Q9H3H1 467 aaKnown RBP23.96■■□□□ 1.43
RAB40C-204ENST00000538492 A0A0J9YVX5 310 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 TRIM64BA6NI03 449 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 PSMD11O00231 422 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 ANGPTL1O95841 491 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 PRNPP04156 253 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 FPR1P21462 350 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 EPHA2P29317 976 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 MC1RQ01726 317 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 TUBA3CQ13748 450 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 CELF5Q8N6W0 485 aaKnown RBP23.96■■□□□ 1.43
RAB40C-204ENST00000538492 TBC1D20Q96BZ9 403 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 CHST8Q9H2A9 424 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 SPNS1Q9H2V7 528 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 DYRK1BQ9Y463 629 aa23.96■■□□□ 1.43
RAB40C-204ENST00000538492 C6P13671 934 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 MAPK9P45984 424 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 TOP3AQ13472 1001 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-204ENST00000538492 IL18R1Q13478 541 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 VEZF1Q14119 521 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ANXA8L1Q5VT79 327 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF852Q6ZMS4 543 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ARMCX6Q7L4S7 300 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 COMMD6Q7Z4G1 85 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF547Q8IVP9 402 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 C2orf73Q8N5S3 287 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-204ENST00000538492 TANKQ92844 425 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 COQ8BQ96D53 544 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 KIF17Q9P2E2 1029 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 PRKAB1Q9Y478 270 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 OTOL1A6NHN0 477 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF197O14709 1029 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 MAN1A2O60476 641 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 UGT2B11O75310 529 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 HOXA9P31269 272 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 KLHL35Q6PF15 583 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ATG16L2Q8NAA4 619 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 TBC1D15Q8TC07 691 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 PLGRKTQ9HBL7 147 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 ZDHHC4Q9NPG8 344 aa23.95■■□□□ 1.42
RAB40C-204ENST00000538492 KIAA1549LQ6ZVL6 1849 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 LZTS3O60299 673 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 INMTO95050 263 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ADH1CP00326 375 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 HNRNPA1P09651 372 aaKnown RBP eCLIP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF8P17098 575 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 FSHRP23945 695 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 CRATP43155 626 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 NFE2L1Q14494 772 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 CAMKMTQ7Z624 323 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF707Q96C28 371 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 REPS1Q96D71 796 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 MAGED4Q96JG8 741 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 EPHX3Q9H6B9 360 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 REEP1Q9H902 201 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 THUMPD1Q9NXG2 353 aaKnown RBP23.94■■□□□ 1.42
RAB40C-204ENST00000538492 PIPSLA2A3N6 862 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 HBA1P69905 142 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 TAP2Q03519 686 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 ZNF763Q0D2J5 394 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 E2F2Q14209 437 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 BCL7AQ4VC05 210 aa23.94■■□□□ 1.42
RAB40C-204ENST00000538492 COX20Q5RI15 118 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms