RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PRKD3O94806 890 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 RAP2AP10114 183 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 TIA1P31483 386 aaKnown RBP eCLIP16.78■□□□□ 0.284e-14■■■■■ 39.7
SNX17-210ENST00000537606 ADPRHP54922 357 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CYP4F2P78329 520 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CHRNB3Q05901 458 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 FAM98BQ52LJ0 330 aaKnown RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 SPIN4Q56A73 249 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 COMMD6Q7Z4G1 85 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 LAS2Q8IYD9 372 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 HS3ST5Q8IZT8 346 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 GALNT15Q8N3T1 639 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 OXR1Q8N573 874 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 WDR34Q96EX3 536 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 C12orf66Q96MD2 445 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 FERD3LQ96RJ6 166 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 INSM2Q96T92 566 aaPredicted RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 BDH2Q9BUT1 245 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 C1QTNF2Q9BXJ5 285 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 XKR8Q9H6D3 395 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 PHPT1Q9NRX4 125 aaPredicted RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 EXO1Q9UQ84 846 aaKnown RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 PRAMEF33A0A0G2JMD5 474 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CLIC1O00299 241 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 ENGP17813 658 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 IGFALSP35858 605 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 MTHFRP42898 656 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 PPP2CBP62714 309 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 PPP2CAP67775 309 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CYBRD1Q53TN4 286 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CPTPQ5TA50 214 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 ANKRD34AQ69YU3 496 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CALHM3Q86XJ0 350 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 TRIM4Q9C037 500 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 SMPD3Q9NY59 655 aaPredicted RBP16.78■□□□□ 0.28
SNX17-210ENST00000537606 LMCD1Q9NZU5 365 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 CA5BQ9Y2D0 317 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 GPSM3Q9Y4H4 160 aa16.78■□□□□ 0.28
SNX17-210ENST00000537606 FEZF1A0PJY2 475 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 PLRG1O43660 514 aaKnown RBP16.77■□□□□ 0.28
SNX17-210ENST00000537606 CREG1O75629 220 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 ABCB1P08183 1280 aaPredicted RBP16.77■□□□□ 0.28
SNX17-210ENST00000537606 PLCL1Q15111 1095 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 TMIGD1Q6UXZ0 262 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 VN1R5Q7Z5H4 357 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 GALNT10Q86SR1 603 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 TRIML2Q8N7C3 387 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 OR8J2Q8NGG1 315 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 SNX19Q92543 992 aa16.77■□□□□ 0.28
SNX17-210ENST00000537606 DGCR14Q96DF8 476 aaKnown RBP16.77■□□□□ 0.28
SNX17-210ENST00000537606 DPH2Q9BQC3 489 aaPredicted RBP16.77■□□□□ 0.28
SNX17-210ENST00000537606 RBM38Q9H0Z9 239 aaKnown RBP16.77■□□□□ 0.28
SNX17-210ENST00000537606 OR52A4PA6NMU1 304 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 H3BSA7 217 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 SERPINA1P01009 418 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 CEACAM5P06731 702 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 KLK1P06870 262 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 IDSP22304 550 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 MYF6P23409 242 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 CASP9P55211 416 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 CLDN2P57739 230 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 C16orf72Q14CZ0 275 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 AGERQ15109 404 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 MLF2Q15773 248 aaPredicted RBP16.77■□□□□ 0.27
SNX17-210ENST00000537606 ZNF385BQ569K4 471 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 ZCCHC8Q6NZY4 707 aaKnown RBP16.77■□□□□ 0.27
SNX17-210ENST00000537606 FAM180BQ6P0A1 224 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 TTC33Q6PID6 262 aaPredicted RBP16.77■□□□□ 0.27
SNX17-210ENST00000537606 STK32CQ86UX6 486 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 TNIP2Q8NFZ5 429 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 DNAJB8Q8NHS0 232 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 SETD7Q8WTS6 366 aaKnown RBP16.77■□□□□ 0.27
SNX17-210ENST00000537606 SLC47A1Q96FL8 570 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 GABRG3Q99928 467 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 MENTQ9BUN1 341 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 TRIT1Q9H3H1 467 aaKnown RBP16.77■□□□□ 0.27
SNX17-210ENST00000537606 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 EHD1Q9H4M9 534 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 LTB4R2Q9NPC1 389 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 ZNF639Q9UID6 485 aa16.77■□□□□ 0.27
SNX17-210ENST00000537606 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 EVPLLA8MZ36 301 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 H3BQ06 376 aaPredicted RBP16.76■□□□□ 0.27
SNX17-210ENST00000537606 H7BY64 318 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 FOXE1O00358 373 aaPredicted RBP16.76■□□□□ 0.27
SNX17-210ENST00000537606 PRMT3O60678 531 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 NR1H2P55055 460 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 DPY19L1Q2PZI1 675 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 TMEM259Q4ZIN3 620 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 LCTLQ6UWM7 567 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 FAM20CQ8IXL6 584 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 DHRSXQ8N5I4 330 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 LINC01555Q8NAE3 123 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 NCSTNQ92542 709 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 PRAP1Q96NZ9 151 aa16.76■□□□□ 0.27
SNX17-210ENST00000537606 ZNF576Q9H609 170 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms