RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	ANKRD53	Q8N9V6	530 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	CAMKV	Q8NCB2	501 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	SLC44A1	Q8WWI5	657 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	MIEF2	Q96C03	454 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	C8orf44	Q96CB5	159 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	MVB12A	Q96EY5	273 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	ATOH8	Q96SQ7	321 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	CRB3	Q9BUF7	120 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	SLC25A23	Q9BV35	468 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	SARG	Q9BW04	601 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	NUDT9	Q9BW91	350 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	YIPF2	Q9BWQ6	316 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	TRIM4	Q9C037	500 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	PELI2	Q9HAT8	420 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	WWOX	Q9NZC7	414 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	FBXL4	Q9UKA2	621 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	RNF112	Q9ULX5	631 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	RELN	P78509	3460 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	MDC1	Q14676	2089 aa	Known RBP	12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	CCDC88C	Q9P219	2028 aa		12.49	□□□□□ -0.41
PRKDC-206	ENST00000536429	BAHCC1	Q9P281	2608 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	ZNF860	A6NHJ4	632 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	UBXN8	O00124	270 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	TXNDC9	O14530	226 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	NDUFS4	O43181	175 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	SUV39H1	O43463	412 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	SLC28A2	O43868	658 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	SERPIND1	P05546	499 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	LTA4H	P09960	611 aa	Known RBP	12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	EPOR	P19235	508 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	GLRB	P48167	497 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	AGTR2	P50052	363 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	OCA2	Q04671	838 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	NDUFA9	Q16795	377 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	SLCO4C1	Q6ZQN7	724 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	CEP128	Q6ZU80	1094 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	ASB18	Q6ZVZ8	466 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	MED25	Q71SY5	747 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	IFT20	Q8IY31	132 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	PDPR	Q8NCN5	879 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	PAFAH2	Q99487	392 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	AICDA	Q9GZX7	198 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	MLXIPL	Q9NP71	852 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	CD274	Q9NZQ7	290 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	HCN3	Q9P1Z3	774 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	C3orf18	Q9UK00	162 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	PTBP2	Q9UKA9	531 aa	Known RBP	12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	NXT1	Q9UKK6	140 aa	Known RBP	12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	CDC14A	Q9UNH5	594 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429	KCNE2	Q9Y6J6	123 aa		12.48	□□□□□ -0.41
PRKDC-206	ENST00000536429		A0A096LPK6	155 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	OR2W5	A6NFC9	320 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	C4orf51	C9J302	202 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	POC1B-GALNT4	F8VUJ3	575 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	AGPS	O00116	658 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	PEX12	O00623	359 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	KERA	O60938	352 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	RDH16	O75452	317 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	NSA2	O95478	260 aa	Known RBP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	MTHFD2	P13995	350 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	GGT5	P36269	586 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	HNF4A	P41235	474 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	AVPR1B	P47901	424 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	HYAL2	Q12891	473 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	CDC16	Q13042	620 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	SLBP	Q14493	270 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	RBBP5	Q15291	538 aa	Known RBP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	RBBP7	Q16576	425 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	SULT1C3	Q6IMI6	304 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	ADNP2	Q6IQ32	1131 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	PLD6	Q8N2A8	252 aa	Known RBP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	AFAP1L2	Q8N4X5	818 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	OR11G2	Q8NGC1	345 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	OR5T3	Q8NGG3	340 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	STAG3L4	Q8TBR4	150 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	CREB3L4	Q8TEY5	395 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	DCAKD	Q8WVC6	231 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	GPR78	Q96P69	363 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	IP6K3	Q96PC2	410 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	AIF1L	Q9BQI0	150 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	TSPYL1	Q9H0U9	437 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	KLHL31	Q9H511	634 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	L2HGDH	Q9H9P8	463 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	NMRAL1	Q9HBL8	299 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	DNAJC11	Q9NVH1	559 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	ZNF358	Q9NW07	568 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	ZFP69B	Q9UJL9	534 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	ACOT9	Q9Y305	439 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	NAALAD2	Q9Y3Q0	740 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	MAP4K5	Q9Y4K4	846 aa		12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429	HEMK1	Q9Y5R4	338 aa	Predicted RBP	12.47	□□□□□ -0.41
PRKDC-206	ENST00000536429		A0A087X1B8	175 aa		12.46	□□□□□ -0.41
PRKDC-206	ENST00000536429	IDS	B3KWA1	339 aa		12.46	□□□□□ -0.41
PRKDC-206	ENST00000536429	SUPT3H	B4E1H0	165 aa		12.46	□□□□□ -0.41
PRKDC-206	ENST00000536429		H0YIG0	161 aa		12.46	□□□□□ -0.41
PRKDC-206	ENST00000536429	SUPT3H	O75486	399 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms