RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 TM4SF19Q96DZ7 209 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 FAM111AQ96PZ2 611 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 TEFMQ96QE5 360 aaKnown RBP12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ZPBPQ9BS86 351 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ASPSCR1Q9BZE9 553 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ACSS2Q9NR19 701 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 OXSMQ9NWU1 459 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 AK5Q9Y6K8 562 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 NCOR2Q9Y618 2525 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 FITM1A5D6W6 292 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 DIAPH2O60879 1101 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 VIMP08670 466 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ITGA1P56199 1179 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ERVPABLB-1P60509 514 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 CYP4F3Q08477 520 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 PRTGQ2VWP7 1150 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 LRRC23Q53EV4 343 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ANKRD53Q8N9V6 530 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 MFSD9Q8NBP5 474 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 CCDC126Q96EE4 140 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 THAP11Q96EK4 314 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 NT5DC2Q9H857 520 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 SERTAD3Q9UJW9 196 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF490Q9ULM2 529 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 MDC1Q14676 2089 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 WDFY3Q8IZQ1 3526 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 A0A1B0GTL3 188 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 PPP6CO00743 305 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 DLGAP3O95886 979 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 DHRS4L1P0CG22 281 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 PIK3CGP48736 1102 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 VSX2P58304 361 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 MAGOHP61326 146 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 CHIT1Q13231 466 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 SLBPQ14493 270 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 WASHC2DQ5SRD0 308 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 C10orf107Q8IVU9 208 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 SLC38A9Q8NBW4 561 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 SELENOSQ9BQE4 189 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 NTMT1Q9BV86 223 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 IPPKQ9H8X2 491 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF232Q9UNY5 417 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 TMEM184BQ9Y519 407 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 PCDHB3Q9Y5E6 796 aa12.15□□□□□ -0.46
RPUSD4-208ENST00000533628 CCT8L1PA6NM43 557 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 P2RX6O15547 441 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 OR2B3O76000 313 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 MED26O95402 600 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 ALDH3A1P30838 453 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 CDH13P55290 713 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 IRF8Q02556 426 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 TRAF3Q13114 568 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 CMPK2Q5EBM0 449 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 TCTE1Q5JU00 501 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 TMEM164Q5U3C3 297 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 TIPARPQ7Z3E1 657 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 OR52B6Q8NGF0 335 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 EFCAB11Q9BUY7 163 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 PITHD1Q9GZP4 211 aaPredicted RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 STARD5Q9NSY2 213 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 MID2Q9UJV3 735 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 ANGPTL3Q9Y5C1 460 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 SPTBP11277 2137 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 TM9SF1O15321 606 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 ZNF749O43361 778 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 OR1F1O43749 312 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 KATNA1O75449 491 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 SLC18A1P54219 525 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 CLCQ05315 142 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 VN1R5Q7Z5H4 357 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 ZNF655Q8N720 491 aaPredicted RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 OR6Y1Q8NGX8 325 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 RNF31Q96EP0 1072 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 SEMA4BQ9NPR2 832 aaPredicted RBP12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 THSD1Q9NS62 852 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 AP1M2Q9Y6Q5 423 aa12.14□□□□□ -0.47
RPUSD4-208ENST00000533628 SDK2Q58EX2 2172 aa12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 C1QTNF9BB2RNN3 333 aa12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 TLX3O43711 291 aaPredicted RBP12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 UGDHO60701 494 aa12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 SCRG1O75711 98 aa12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 STK17BO94768 372 aa12.13□□□□□ -0.47
RPUSD4-208ENST00000533628 SUPT7LO94864 414 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms