RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 C10orf53Q8N6V4 93 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 ADAD2Q8NCV1 583 aaKnown RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 TRIM58Q8NG06 486 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 OR7G3Q8NG95 312 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 CKAP2Q8WWK9 683 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 ZNF486Q96H40 463 aaPredicted RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 RBM41Q96IZ5 413 aaKnown RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 ART5Q96L15 291 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 TSSK2Q96PF2 358 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 ALKBH7Q9BT30 221 aaPredicted RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 RBM4Q9BWF3 364 aaKnown RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 ALDH8A1Q9H2A2 487 aaPredicted RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 C10orf88Q9H8K7 445 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 C3orf14Q9HBI5 128 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 RAVER2Q9HCJ3 691 aaKnown RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 PLCXD1Q9NUJ7 323 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 C2orf42Q9NWW7 574 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 POLKQ9UBT6 870 aa3.95□□□□□ -1.78
PICALM-221ENST00000533350 NOCTQ9UK39 431 aaKnown RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 ELF5Q9UKW6 265 aaPredicted RBP3.95□□□□□ -1.78
PICALM-221ENST00000533350 C2CD4DB7Z1M9 353 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 H3BMM5 538 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 SLC7A4O43246 635 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CYTIPO60759 359 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 KRT33AO76009 404 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 PAK4O96013 591 aaPredicted RBP3.94□□□□□ -1.78
PICALM-221ENST00000533350 GH1P01241 217 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CFC1P0CG37 223 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CPA3P15088 417 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CEBPBP17676 345 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 TIA1P31483 386 aaKnown RBP eCLIP3.94□□□□□ -1.78
PICALM-221ENST00000533350 MMP12P39900 470 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 OR3A3P47888 321 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 NR0B1P51843 470 aaKnown RBP3.94□□□□□ -1.78
PICALM-221ENST00000533350 HYAL1Q12794 435 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 PPA1Q15181 289 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CCDC6Q16204 474 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 SUSD4Q5VX71 490 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 ARHGAP17Q68EM7 881 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 PRSS55Q6UWB4 352 aaPredicted RBP3.94□□□□□ -1.78
PICALM-221ENST00000533350 IL17RELQ6ZVW7 336 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 GPR141Q7Z602 305 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 SMYD1Q8NB12 490 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 OR5T2Q8NGG2 359 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 AZIN2Q96A70 460 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 CDKN2AIPNLQ96HQ2 116 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 LITAFQ99732 161 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 C17orf62Q9BQA9 187 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 ATG101Q9BSB4 218 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 FUT8Q9BYC5 575 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 SPHK2Q9NRA0 654 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 KLHL8Q9P2G9 620 aaPredicted RBP3.94□□□□□ -1.78
PICALM-221ENST00000533350 LEF1Q9UJU2 399 aaPredicted RBP3.94□□□□□ -1.78
PICALM-221ENST00000533350 ANGPTL3Q9Y5C1 460 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 PCDHGA1Q9Y5H4 931 aa3.94□□□□□ -1.78
PICALM-221ENST00000533350 C13orf42A0A1B0GVH6 325 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 C2orf92A0A1B0GVN3 265 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 SDR42E2A6NKP2 422 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 KIF5CO60282 957 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 GRAP2O75791 330 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 IGHEP01854 428 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 RBMS1P29558 406 aaKnown RBP3.93□□□□□ -1.78
PICALM-221ENST00000533350 SLC1A3P43003 542 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 XGP55808 180 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 GUCY2DQ02846 1103 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 TMEM187Q14656 261 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 EFTUD2Q15029 972 aaKnown RBP eCLIP3.93□□□□□ -1.783e-6■□□□□ 11.3
PICALM-221ENST00000533350 ZNF674Q2M3X9 581 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 ARMCX4Q5H9R4 360 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 LRRC38Q5VT99 294 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 ADAM5Q6NVV9 412 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 LINC00696Q6ZRV3 163 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 CCDC83Q8IWF9 413 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 UNC45BQ8IWX7 931 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 OR4D10Q8NGI6 311 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 ZNRF4Q8WWF5 429 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 NR4A3Q92570 626 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 AP2M1Q96CW1 435 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 NEDD4LQ96PU5 975 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 USP28Q96RU2 1077 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 IL12RB2Q99665 862 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 TDRD1Q9BXT4 1180 aaKnown RBP3.93□□□□□ -1.78
PICALM-221ENST00000533350 C2orf40Q9H1Z8 148 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 MTIF3Q9H2K0 278 aaKnown RBP3.93□□□□□ -1.78
PICALM-221ENST00000533350 UBQLN3Q9H347 655 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 EGLN3Q9H6Z9 239 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 PANK4Q9NVE7 773 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 DNAJC17Q9NVM6 304 aaKnown RBP3.93□□□□□ -1.78
PICALM-221ENST00000533350 SLCO1C1Q9NYB5 712 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 CACNG5Q9UF02 275 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 POMT2Q9UKY4 750 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 PLCL2Q9UPR0 1127 aa3.93□□□□□ -1.78
PICALM-221ENST00000533350 HBS1LQ9Y450 684 aaKnown RBP3.93□□□□□ -1.78
PICALM-221ENST00000533350 HEG1Q9ULI3 1381 aa3.92□□□□□ -1.78
PICALM-221ENST00000533350 LRRD1A4D1F6 860 aa3.92□□□□□ -1.78
PICALM-221ENST00000533350 MSGN1A6NI15 193 aa3.92□□□□□ -1.78
PICALM-221ENST00000533350 TCP10L2B9ZVM9 353 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms