RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MEF2AQ02078 507 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 EIPR1Q53HC9 387 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 KIAA1614Q5VZ46 1190 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 PLET1Q6UQ28 207 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SLC39A5Q6ZMH5 540 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 EZH1Q92800 747 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 CASD1Q96PB1 797 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 TRNAU1APQ9NX07 287 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 UTS2RQ9UKP6 389 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SORBS2O94875 1100 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 OR5F1O95221 314 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 RPS17P08708 135 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 TIA1P31483 386 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 KDELR2P33947 212 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ADRA1AP35348 466 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ARCN1P48444 511 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF140P52738 457 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SLC8B1Q6J4K2 584 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 TMEM25Q86YD3 366 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 MDGA1Q8NFP4 955 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 MYOCOSA0A1B0GUC4 107 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 ELAVL3Q14576 367 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 TMEM44Q2T9K0 475 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 SNAP47Q5SQN1 464 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 LETMD1Q6P1Q0 360 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 GALNT7Q86SF2 657 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 GPR151Q8TDV0 419 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 SORCS1Q8WY21 1168 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 NDRG2Q9UN36 371 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 TNFRSF21O75509 655 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 RCVRNP35243 200 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 AVPR1BP47901 424 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 TM4SF4P48230 202 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 CCT3P49368 545 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 NUDT6P53370 316 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 FOXA1P55317 472 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF648Q5T619 568 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 USP43Q70EL4 1123 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 CBARPQ8N350 705 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 CAPSLQ8WWF8 208 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 MAPKAP1Q9BPZ7 522 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 LIN28AQ9H9Z2 209 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 POLMQ9NP87 494 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 PLAGL1Q9UM63 463 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 PCDHB11Q9Y5F2 797 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 LOXHD1Q8IVV2 1947 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 RFPL2O75678 378 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 CTSAP10619 480 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 SDC2P34741 201 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 NRIP1P48552 1158 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 MXD1Q05195 221 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 DSC1Q08554 894 aa14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 SUZ12Q15022 739 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 HDAC2Q92769 488 aaKnown RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 SOX17Q9H6I2 414 aaPredicted RBP14.81□□□□□ -0.04
PCDHA3-202ENST00000532566 TTC34A8MYJ7 566 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 BLKP51451 505 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ATP12AP54707 1039 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 TUBA3CQ13748 450 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 C18orf21Q32NC0 220 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 MINDY4Q4G0A6 757 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 REEP3Q6NUK4 255 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 CLEC14AQ86T13 490 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RNF130Q86XS8 419 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RAB7BQ96AH8 199 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF696Q9H7X3 374 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 AKAP7Q9P0M2 348 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 PHF24Q9UPV7 400 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 SATB2Q9UPW6 733 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 A0A1W2PPW3 197 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 GM2AP17900 193 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RAB15P59190 212 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 EIF4HQ15056 248 aaKnown RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 LARP4Q71RC2 724 aaKnown RBP eCLIP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ZFAND2BQ8WV99 257 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 MYRFLQ96LU7 910 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 CNPPD1Q9BV87 410 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 KLF16Q9BXK1 252 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ABCB9Q9NP78 766 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 TAS2R9Q9NYW1 312 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ITGB1BP2Q9UKP3 347 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 TLR4O00206 839 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 CAPN5O15484 640 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 SMAD6O43541 496 aaKnown RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 GABRB3P28472 473 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 SLC14A2Q15849 920 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 HPS1Q92902 700 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RACGAP1Q9H0H5 632 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 CLEC4MQ9H2X3 399 aaPredicted RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 ACSL5Q9ULC5 683 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 HHLA1C9JL84 531 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 HPRP00739 348 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 AZGP1P25311 298 aaKnown RBP14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RGRP47804 291 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 RAB8AP61006 207 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 PCDH1Q08174 1060 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 SLC39A11Q8N1S5 342 aa14.8□□□□□ -0.04
PCDHA3-202ENST00000532566 LINC00471Q8N535 108 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms