RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ANKRD20A12PQ8NF67 263 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 RHOXF1Q8NHV9 184 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 CEP295NLQ96MC4 621 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 RBM14Q96PK6 669 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 DESI2Q9BSY9 194 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 EDEM3Q9BZQ6 932 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 GPN1Q9HCN4 374 aaPredicted RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 TAS2R14Q9NYV8 317 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 EHD2Q9NZN4 543 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 CHORDC1Q9UHD1 332 aaPredicted RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 TEKT2Q9UIF3 430 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 DAPK2Q9UIK4 370 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 VPS28Q9UK41 221 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 NENFQ9UMX5 172 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 MTMR6Q9Y217 621 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 TMED5Q9Y3A6 229 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 CMAHPQ9Y471 501 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 WIPI2Q9Y4P8 454 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.25□□□□□ -1.895e-6■■□□□ 12.8
PTPRK-220ENST00000531466 SCRIBQ14160 1630 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 A0A087WWV3 80 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ARPC4-TTLL3A0A0A6YYG9 625 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 LIPT2A6NK58 231 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 UBXN8O00124 270 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SGK1O00141 431 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CACNB4O00305 520 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CETN3O15182 167 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF354AO60765 605 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 RTN2O75298 545 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 GLRA3O75311 464 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 TSPAN9O75954 239 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CDK2AP2O75956 126 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 FGFR1OPO95684 399 aaKnown RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 PAHP00439 452 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 EIF2S1P05198 315 aaKnown RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF24P17028 368 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 HLA-DPA1P20036 260 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 MAPK4P31152 587 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 NF2P35240 595 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SULT1E1P49888 294 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ETV1P50549 477 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ALDH3A2P51648 485 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 XGP55808 180 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CTAG1AP78358 180 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 AP1B1Q10567 949 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CRYMQ14894 314 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 DLG2Q15700 870 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 WSCD2Q2TBF2 565 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CEP55Q53EZ4 464 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 PDLIM3Q53GG5 364 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 GKAP1Q5VSY0 366 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ZER1Q7Z7L7 766 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SPATA24Q86W54 205 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SCYL3Q8IZE3 742 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF619Q8N2I2 560 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 KLHDC1Q8N7A1 406 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 OR5M8Q8NGP6 311 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SCFD2Q8WU76 684 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 POMGNT1Q8WZA1 660 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CNRIP1Q96F85 164 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 COG3Q96JB2 828 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CNDP1Q96KN2 507 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 MAP3K3Q99759 626 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 NKX3-1Q99801 234 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 CHCHD5Q9BSY4 110 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 TEX13BQ9BXU2 312 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 VCPKMTQ9H867 229 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 HAUS2Q9NVX0 235 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 UBAP1Q9NZ09 502 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SPATA7Q9P0W8 599 aa3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SUCLA2Q9P2R7 463 aaPredicted RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 HOOK1Q9UJC3 728 aaKnown RBP3.24□□□□□ -1.89
PTPRK-220ENST00000531466 SPAG9O60271 1321 aaKnown RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 EVC2Q86UK5 1308 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CLRN2A0PK11 232 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 AGAP14A8MT82 685 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 H0Y626 953 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 AP3B1O00203 1094 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 AP3D1O14617 1153 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TXNL1O43396 289 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 SSX4O60224 188 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF254O75437 659 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 RSL1D1O76021 490 aaKnown RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 GOSR1O95249 250 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 STARD3NLO95772 234 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 SRPRAP08240 638 aaKnown RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 TPM1P09493 284 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 MAPK3P27361 379 aaPredicted RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 HADHAP40939 763 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 IFNAR2P48551 515 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 RWDD2BP57060 319 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 PRAMEP78395 509 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 IL1RL1Q01638 556 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 EPS8Q12929 822 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CLPPQ16740 277 aaPredicted RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 ASTE1Q2TB18 679 aaPredicted RBP3.23□□□□□ -1.89
PTPRK-220ENST00000531466 KBTBD12Q3ZCT8 623 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 DUSP28Q4G0W2 176 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 PLEKHS1Q5SXH7 462 aa3.23□□□□□ -1.89
PTPRK-220ENST00000531466 CCDC183Q5T5S1 534 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms