RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NPPBP16860 134 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 AGXTP21549 392 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 NTHL1P78549 312 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 DPTQ07507 201 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 ELOAQ14241 798 aaKnown RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 POM121L1PQ3SYA9 428 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 ANKRD26P1Q6NSI1 321 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 GRASPQ7Z6J2 395 aaPredicted RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 TSPYL5Q86VY4 417 aaPredicted RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 CFAP206Q8IYR0 622 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 C11orf65Q8NCR3 313 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 OR9A1PQ8NGU1 263 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 TBC1D15Q8TC07 691 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 FOXJ1Q92949 421 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 EPYCQ99645 322 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 WRAP53Q9BUR4 548 aaKnown RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 DPEP2Q9H4A9 486 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 GPR34Q9UPC5 381 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 ITM2BQ9Y287 266 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PADI2Q9Y2J8 665 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 TPRKBQ9Y3C4 175 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 SAMHD1Q9Y3Z3 626 aaKnown RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PCM1Q15154 2024 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 A0A0J9YVX5 310 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 hCG_2039718K7EN88 272 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 SUV39H1O43463 412 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PCMT1P22061 227 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PBLDP30039 288 aaPredicted RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 ENTPD1P49961 510 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 VTCN1Q7Z7D3 282 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 BPIFB6Q8NFQ5 453 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 VN1R2Q8NFZ6 395 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 UBE2E3Q969T4 207 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 NUS1Q96E22 293 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 DPH2Q9BQC3 489 aaPredicted RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 TRIM39Q9HCM9 518 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 PDP1Q9P0J1 537 aaPredicted RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 NDRG4Q9ULP0 352 aaKnown RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 NUP210Q8TEM1 1887 aaPredicted RBP16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SH3PXD2BA1X283 911 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SPINT1O43278 529 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 BCL10O95999 233 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 C1QCP02747 245 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 C9P02748 559 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 EPCAMP16422 314 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 CEBPBP17676 345 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 RBBP4Q09028 425 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SF1Q15637 639 aaKnown RBP16.56■□□□□ 0.24
BRCA2-204ENST00000530893 MOGQ16653 247 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 ADNP2Q6IQ32 1131 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 FAHD1Q6P587 224 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 TRAPPC5Q8IUR0 188 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 OR4A15Q8NGL6 344 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SETD7Q8WTS6 366 aaKnown RBP16.56■□□□□ 0.24
BRCA2-204ENST00000530893 OR8D1Q8WZ84 308 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 BORCS5Q969J3 196 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 MTERF3Q96E29 417 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 C7orf34Q96L11 122 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 DOHHQ9BU89 302 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 RIBC2Q9H4K1 309 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 PRM3Q9NNZ6 103 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SCN3BQ9NY72 215 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 SH3BP4Q9P0V3 963 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 KIF17Q9P2E2 1029 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 RWDD3Q9Y3V2 267 aa16.56■□□□□ 0.24
BRCA2-204ENST00000530893 NUP214P35658 2090 aaPredicted RBP16.56■□□□□ 0.24
BRCA2-204ENST00000530893 EDDM13A0A1B0GTR0 161 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 MITFO75030 526 aaPredicted RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 IRS1P35568 1242 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PIK3CBP42338 1070 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 GPR1P46091 355 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PHEXP78562 749 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PDE7AQ13946 482 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 SLBPQ14493 270 aaKnown RBP eCLIP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 IQCCQ4KMZ1 466 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 KIAA1614Q5VZ46 1190 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF366Q8N895 744 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 TTC29Q8NA56 475 aaPredicted RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 GPR156Q8NFN8 814 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PPP1R16AQ96I34 528 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 DUSP21Q9H596 190 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 CCNB1IP1Q9NPC3 277 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 DMRT3Q9NQL9 472 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 KRT84Q9NSB2 600 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 THUMPD1Q9NXG2 353 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 MRPS23Q9Y3D9 190 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PCDHGB3Q9Y5G1 929 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 GMPPBQ9Y5P6 360 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PIPSLA2A3N6 862 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 VEGFDO43915 354 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 INHBBP09529 407 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 CLK3P49761 638 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 RAB15P59190 212 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 KCNJ10P78508 379 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 TAP2Q03519 686 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms