RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CAPSQ13938 189 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 EMC2Q15006 297 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ATP6AP1LQ52LC2 224 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DCAF8Q5TAQ9 597 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 RNLSQ5VYX0 342 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 TMPRSS9Q7Z410 1059 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SCUBE3Q8IX30 993 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CAMKVQ8NCB2 501 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CLHC1Q8NHS4 586 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 RHEBL1Q8TAI7 183 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SLC35F5Q8WV83 523 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NT5C3BQ969T7 300 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PPM1MQ96MI6 270 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 RBM14Q96PK6 669 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PDCD2LQ9BRP1 358 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 RASSF1Q9NS23 344 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ACTR10Q9NZ32 417 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NCKAP1Q9Y2A7 1128 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NPTNQ9Y639 398 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PIPSLA2A3N6 862 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 I6L893 689 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CBX4O00257 560 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 DCLK1O15075 740 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 EPOP01588 193 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TSPAN19P0C672 248 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 EPHA2P29317 976 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CRYBB2P43320 205 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GSTM5P46439 218 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GMPSP49915 693 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PLK1P53350 603 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CRISP3P54108 245 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 FKBP1AP62942 108 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TIAL1Q01085 375 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CTBP1Q13363 440 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CAMK2GQ13555 558 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TSTQ16762 297 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 INO80DQ53TQ3 878 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CELF3Q5SZQ8 465 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 DDI2Q5TDH0 399 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 XRRA1Q6P2D8 792 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TMEM207Q6UWW9 146 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ADGRD2Q7Z7M1 963 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TRIM69Q86WT6 500 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ZDHHC21Q8IVQ6 265 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 BVESQ8NE79 360 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 C19orf18Q8NEA5 215 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SH3RF2Q8TEC5 729 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 UBE2FQ969M7 185 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 C11orf24Q96F05 449 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 C12orf42Q96LP6 360 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 OR5M11Q96RB7 305 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 BBS4Q96RK4 519 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TMEM175Q9BSA9 504 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PPP1R14DQ9NXH3 145 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 BABAM2Q9NXR7 383 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CD274Q9NZQ7 290 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PLEKHB1Q9UF11 243 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GPN3Q9UHW5 284 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 EVLQ9UI08 416 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GABRQQ9UN88 632 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 LSM2Q9Y333 95 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TRBV5-3A0A0A0MS03 114 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 A0A1B0GTL3 188 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 AIPO00170 330 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ZBTB24O43167 697 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 STSP08842 583 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 NPR1P16066 1061 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PAMP19021 973 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 C4BPBP20851 252 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PTPN5P54829 565 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TCP10Q12799 353 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 CAMK2DQ13557 499 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 DOC2BQ14184 412 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 FCN2Q15485 313 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PYDC2Q56P42 97 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 FAM109BQ6ICB4 259 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ADGRF3Q8IZF5 1079 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF655Q8N720 491 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PLA2G15Q8NCC3 412 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PHF21AQ96BD5 680 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SIPA1Q96FS4 1042 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TOX2Q96NM4 488 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 PIP5K1AQ99755 562 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GPR63Q9BZJ6 419 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 MED28Q9H204 178 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 TTYH1Q9H313 450 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SLC28A3Q9HAS3 691 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 HHATLQ9HCP6 504 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 EQTNQ9NQ60 294 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 OGDHLQ9ULD0 1010 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SAMD4AQ9UPU9 718 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 EVPLQ92817 2033 aa7.86□□□□□ -1.15
CSDE1-214ENST00000530886 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
CSDE1-214ENST00000530886 GRAP2O75791 330 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms