RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 APOBEC4Q8WW27 367 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 DRC3Q9H069 523 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 EHD1Q9H4M9 534 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 GEMIN8Q9NWZ8 242 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 ZFP69BQ9UJL9 534 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 MRPS2Q9Y399 296 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 ASB1Q9Y576 335 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 IGLV3-12A0A075B6K2 115 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 A0A0A6YYC8 382 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 IQANK1A0A1B0GTG1 560 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 I3L1I5 382 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 CLGNO14967 610 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PRPF4O43172 522 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PRAMEF4O60810 478 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SHBGP04278 402 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 UMODP07911 640 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 RBP1P09455 135 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC35G6P0C7Q6 338 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 EPORP19235 508 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 FBLP22087 321 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 CXCR2P25025 360 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 FOXL2P58012 376 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 DSG2Q14126 1118 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 LY6DQ14210 128 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 RBBP5Q15291 538 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PDK4Q16654 411 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 TSNAXIP1Q2TAA8 658 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PRAMEF9Q5VWM5 478 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 WDR93Q6P2C0 686 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 RAB43Q86YS6 212 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 TMEM151BQ8IW70 566 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 AMER3Q8N944 861 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 ANKRD53Q8N9V6 530 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 TRPV3Q8NET8 790 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 NT5CQ8TCD5 201 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 MOCOSQ96EN8 888 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 WDR34Q96EX3 536 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 MMABQ96EY8 250 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SPSB2Q99619 263 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PITHD1Q9GZP4 211 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 NT5DC2Q9H857 520 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 COPG2Q9UBF2 871 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 CTSFQ9UBX1 484 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 ZNF282Q9UDV7 671 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 NXT1Q9UKK6 140 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 MAN2B2Q9Y2E5 1009 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC22A7Q9Y694 548 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 CACNA1GO43497 2377 aa12.04□□□□□ -0.48
CCDC90B-216ENST00000529856 H0YIG0 161 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 K7EPI3 171 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 NDUFS4O43181 175 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 NSA2O95478 260 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 FAM87AP0C7U9 286 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 GFAPP14136 432 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 OTX2P32243 289 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 CASP2P42575 452 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 AVPR1BP47901 424 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 ALDH18A1P54886 795 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 POLE2P56282 527 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 OCA2Q04671 838 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 PCDH1Q08174 1060 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 DOC2AQ14183 400 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 E2F2Q14209 437 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 TBCCQ15814 346 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 PFKFB4Q16877 469 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 ERCC6LQ2NKX8 1250 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 TMIGD1Q6UXZ0 262 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 PRSS41Q7RTY9 318 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 APLFQ8IW19 511 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 AFAP1L2Q8N4X5 818 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 OR9A4Q8NGU2 314 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 STT3BQ8TCJ2 826 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 MZB1Q8WU39 189 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 NACC2Q96BF6 587 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 SCYL1Q96KG9 808 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 IP6K3Q96PC2 410 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 MRPL57Q9BQC6 102 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 ADNPQ9H2P0 1102 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 PPCSQ9HAB8 311 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 ANKHQ9HCJ1 492 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 OPTCQ9UBM4 332 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 SCN3AQ9NY46 2000 aa12.03□□□□□ -0.48
CCDC90B-216ENST00000529856 WFS1O76024 890 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SERPIND1P05546 499 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SERPINA6P08185 405 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 ZGLP1P0C6A0 271 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SFTPCP11686 197 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 IL1RNP18510 177 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 HSD17B3P37058 310 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 IRF8Q02556 426 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms