RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 GRB7Q14451 532 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 GRTP1Q5TC63 336 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 KCTD11Q693B1 232 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 LINC00696Q6ZRV3 163 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 TTLL10Q6ZVT0 673 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 OVCH1Q7RTY7 1134 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 SNX20Q7Z614 316 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 MPP5Q8N3R9 675 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 C2orf73Q8N5S3 287 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 METTL27Q8N6F8 245 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 LINC01555Q8NAE3 123 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 ITLN2Q8WWU7 325 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 TM9SF4Q92544 642 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 DCUN1D1Q96GG9 259 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 FSD1LQ9BXM9 530 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 IL22Q9GZX6 179 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 MANSC1Q9H8J5 431 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 TXLNGQ9NUQ3 528 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 CTSFQ9UBX1 484 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 GRID1Q9ULK0 1009 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 USH1CQ9Y6N9 552 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 DCHS2Q6V1P9 2916 aa8.16□□□□□ -1.1
TGFBR3-208ENST00000529608 FAM237BA0A1B0GVD1 139 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SLC5A10A0PJK1 596 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 OR51F1A6NGY5 319 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ANKRD65E5RJM6 399 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 H0YHG0 523 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 BIRC5O15392 142 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 NRP2O60462 931 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 JRKO75564 520 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 DCTN3O75935 186 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ATP5HO75947 161 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 USP1O94782 785 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TGDSO95455 350 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ONECUT2O95948 504 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 IGHEP01854 428 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SNRPB2P08579 225 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TROVE2P10155 538 aaKnown RBP eCLIP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ALAS2P22557 587 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SHMT2P34897 504 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CRHR1P34998 444 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SPRP35270 261 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 GRIA3P42263 894 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 OR1D4P47884 311 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 GEMP55040 296 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 RIPPLY3P57055 190 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CDH17Q12864 832 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CRYMQ14894 314 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CDSNQ15517 529 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SPDYAQ5MJ70 313 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 AGAP7PQ5VUJ5 663 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ATG16L1Q676U5 607 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 FCRL6Q6DN72 434 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TLDC1Q6P9B6 456 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 PACS1Q6VY07 963 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 DNAAF3Q8N9W5 541 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 OR11G2Q8NGC1 345 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 OR52K1Q8NGK4 314 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 PSMF1Q92530 271 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 N4BP2L2Q92802 583 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 RELTQ969Z4 430 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ULK4Q96C45 1275 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 THOC3Q96J01 351 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 LURAP1Q96LR2 239 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 AGAP4Q96P64 663 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CPNE1Q99829 537 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 C17orf62Q9BQA9 187 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 NDC1Q9BTX1 674 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 SMYD2Q9NRG4 433 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 NSMCE4AQ9NXX6 385 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 PLA2G3Q9NZ20 509 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TXNDC16Q9P2K2 825 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 COPG2Q9UBF2 871 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 DCDC2Q9UHG0 476 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 PLCL2Q9UPR0 1127 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 ASF1AQ9Y294 204 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 TDRKHQ9Y2W6 561 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 PLLPQ9Y342 182 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 CAPN7Q9Y6W3 813 aa8.15□□□□□ -1.1
TGFBR3-208ENST00000529608 A0A1B0GX78 115 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 KRT87PA6NCN2 255 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 CFAP73A6NFT4 308 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 VSTM2BA6NLU5 285 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 ISM1B1AKI9 464 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 C19orf84I3L1E1 186 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 GOLGA8RI6L899 631 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 PCDH17O14917 1159 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 PIAS1O75925 651 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 CRTAMO95727 393 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 F10P00742 488 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 CELA2AP08217 269 aa8.14□□□□□ -1.11
TGFBR3-208ENST00000529608 RALBP11234 206 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms