RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SPATC1Q76KD6 591 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 METTL4Q8N3J2 472 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 PSD4Q8NDX1 1056 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 KBTBD8Q8NFY9 601 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 OR52J3Q8NH60 311 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 APH1BQ8WW43 257 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF486Q96H40 463 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CEP19Q96LK0 163 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 Q96MT0 163 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 NUAK2Q9H093 628 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 TP63Q9H3D4 680 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 NEK6Q9HC98 313 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 IL26Q9NPH9 171 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 PCDHGA6Q9Y5G7 932 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 PTPRDP23468 1912 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SLC38A8A6NNN8 435 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 KRT75O95678 551 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 KLKB1P03952 638 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 STSP08842 583 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 HIST1H2AGP0C0S8 130 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 HIST1H2ADP20671 130 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 MZF1P28698 734 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SLC19A1P41440 591 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF45Q02386 682 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 MRPL58Q14197 206 aaKnown RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SHHQ15465 462 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 NDUFA5Q16718 116 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SPANXN2Q5MJ10 180 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 GPRC6AQ5T6X5 926 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ERICH5Q6P6B1 374 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF605Q86T29 641 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 CLECL1Q8IZS7 167 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ING5Q8WYH8 240 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 MYO19Q96H55 970 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 HIST1H2AHQ96KK5 128 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 HIST1H2AJQ99878 128 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 H2AFJQ9BTM1 129 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 CEP44Q9C0F1 390 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 NDEL1Q9GZM8 345 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 DDX28Q9NUL7 540 aaKnown RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 NLRC5Q86WI3 1866 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SYN3O14994 580 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 GRM6O15303 877 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SUV39H1O43463 412 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SH3BGRLO75368 114 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.481e-12■□□□□ 9.8
CAPN1-208ENST00000527323 CASP3P42574 277 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 HSPA14Q0VDF9 509 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 DMC1Q14565 340 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ARMCX4Q5H9R4 360 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 CBLL1Q75N03 491 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 KIAA1958Q8N8K9 716 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 GGHQ92820 318 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 TESCQ96BS2 214 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 FEVQ99581 238 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 CDADC1Q9BWV3 514 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 TPK1Q9H3S4 243 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 IGFLR1Q9H665 355 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 MOV10Q9HCE1 1003 aaKnown RBP12.08□□□□□ -0.48
CAPN1-208ENST00000527323 GPR83Q9NYM4 423 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 SPASTQ9UBP0 616 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 UGT2A1Q9Y4X1 527 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
CAPN1-208ENST00000527323 GLYATL1P3A0A0U1RQE8 302 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 FAM47E-STBD1D6RA91 191 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 HOXA2O43364 376 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 TGM5O43548 720 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 MFN2O95140 757 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PTTG1O95997 202 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ITPKAP23677 461 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 GKP32189 559 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ZXDBP98169 803 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 KRR1Q13601 381 aaKnown RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF689Q96CS4 500 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 HRASLS5Q96KN8 279 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF334Q9HCZ1 680 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 MRPL17Q9NRX2 175 aaKnown RBP12.07□□□□□ -0.48
CAPN1-208ENST00000527323 RAD18Q9NS91 495 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 EHD3Q9NZN3 535 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 PSORS1C1Q9UIG5 152 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 HCFC2Q9Y5Z7 792 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 A0A1W2PRU2 124 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 A6NL46 340 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 K7ERQ8 282 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 DSCR3O14972 297 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 CD160O95971 181 aa12.07□□□□□ -0.48
CAPN1-208ENST00000527323 NUDT7P0C024 238 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms