RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SLC26A7Q8TE54 656 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 RIT1Q92963 219 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 NXPE2Q96DL1 559 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 NEDD4LQ96PU5 975 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 ATOH8Q96SQ7 321 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 IARS2Q9NSE4 1012 aaKnown RBP3.65□□□□□ -1.83
CD44-215ENST00000525241 PAK5Q9P286 719 aa3.65□□□□□ -1.83
CD44-215ENST00000525241 ANTXRLA6NF34 631 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 GLTPD2A6NH11 291 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 EPM2AB3EWF7 344 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 E9PQ18 207 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 PI4K2BG5E9Z4 385 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 H3BMM5 538 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 SAP30O75446 220 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 C9P02748 559 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 ANKRD34CP0C6C1 535 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 TRIM49P0CI25 452 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 TRIM49CP0CI26 452 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 KRT5P13647 590 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 MYOGP15173 224 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 CLDN17P56750 224 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 FASTKD3Q14CZ7 662 aaKnown RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 LPAL2Q16609 132 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 DUSP5Q16690 384 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 MTHFSDQ2M296 383 aaKnown RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 MOGAT2Q3SYC2 334 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 C2CD6Q53TS8 623 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 SPOUT1Q5T280 376 aaKnown RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 MPP7Q5T2T1 576 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 METTL7BQ6UX53 244 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 STXBP4Q6ZWJ1 553 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 C5orf24Q7Z6I8 188 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 PRSS35Q8N3Z0 413 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 OR4D10Q8NGI6 311 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 DEPDC1BQ8WUY9 529 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 CORO2AQ92828 525 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 EXOC4Q96A65 974 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 CNRIP1Q96F85 164 aaPredicted RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 ERO1AQ96HE7 468 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 AK8Q96MA6 479 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 PRICKLE1Q96MT3 831 aaPredicted RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 AGTPBP1Q9UPW5 1226 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 PA2G4Q9UQ80 394 aaKnown RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 RUVBL2Q9Y230 463 aaKnown RBP3.64□□□□□ -1.83
CD44-215ENST00000525241 WIPI2Q9Y4P8 454 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 POMT1Q9Y6A1 747 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 NPHP3Q7Z494 1330 aa3.64□□□□□ -1.83
CD44-215ENST00000525241 SPATA31D1Q6ZQQ2 1576 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 ARID2Q68CP9 1835 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TRAV18A0A075B6X5 111 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 LOC105371242A0A075B767 164 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 A0A087WZ39 114 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 SLC1A7O00341 560 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 WDR46O15213 610 aaKnown RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 SURF4O15260 269 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TLX2O43763 284 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 IDH3BO43837 385 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 ECE2O60344 883 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 SELENOFO60613 162 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 CRLF1O75462 422 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 MOCS2O96007 188 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 RPN1P04843 607 aaKnown RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 SSTR1P30872 391 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TMEM50BP56557 158 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 LY6DQ14210 128 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TWISTNBQ3B726 338 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 SNAI3Q3KNW1 292 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TAF1BQ53T94 588 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 FGD3Q5JSP0 725 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 CHMP1BQ7LBR1 199 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 AQP11Q8NBQ7 271 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 FAM162AQ96A26 154 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 AGAP4Q96P64 663 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 ALKBH7Q9BT30 221 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 C10orf88Q9H8K7 445 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 MINDY3Q9H8M7 445 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 MTHFD2LQ9H903 347 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 RAB9BQ9NP90 201 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 B3GAT2Q9NPZ5 323 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 TEX10Q9NXF1 929 aaPredicted RBP3.63□□□□□ -1.83
CD44-215ENST00000525241 NDE1Q9NXR1 346 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 NUDT4Q9NZJ9 180 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 NEDD4P46934 1319 aa3.63□□□□□ -1.83
CD44-215ENST00000525241 A8MVM7 634 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 NPIPA3F8WFD2 350 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 G3V2L1 256 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 RTCAO00442 366 aaKnown RBP3.62□□□□□ -1.83
CD44-215ENST00000525241 DLATP10515 647 aaKnown RBP3.62□□□□□ -1.83
CD44-215ENST00000525241 EDNRAP25101 427 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 PDHA2P29803 388 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 RBP5P82980 135 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 FAM189A2Q15884 450 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 ATP1A1-AS1Q5TC04 95 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 FAM46CQ5VWP2 391 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 ARMC3Q5W041 872 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 SHQ1Q6PI26 577 aaKnown RBP3.62□□□□□ -1.83
CD44-215ENST00000525241 DHRS11Q6UWP2 260 aa3.62□□□□□ -1.83
CD44-215ENST00000525241 PET117Q6UWS5 81 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms