RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 DNAJC13O75165 2243 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 NSD1Q96L73 2696 aaPredicted RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 GOLGA6L19H0YKK7 550 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 H7BY64 318 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PRMT5O14744 637 aaPredicted RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PJA2O43164 708 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PEX1O43933 1283 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 B4GALT2O60909 372 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PKMP14618 531 aaKnown RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PCSK6P29122 969 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 UQCRC1P31930 480 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 CCNFP41002 786 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 GRIA1P42261 906 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 AGTR2P50052 363 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 EMP3P54852 163 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 GDF10P55107 478 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 DLX5P56178 289 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 OLR1P78380 273 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PLGLB1Q02325 96 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PTK6Q13882 451 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 NAA25Q14CX7 972 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 TYSND1Q2T9J0 566 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 EMC4Q5J8M3 183 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 TSTD2Q5T7W7 516 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 CAVIN1Q6NZI2 390 aaKnown RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 BIVMQ86UB2 503 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF227Q86WZ6 799 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 CDC20BQ86Y33 519 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 VWA5B2Q8N398 1253 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 OR5T3Q8NGG3 340 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 OR9A1PQ8NGU1 263 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 HMGCLL1Q8TB92 370 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 MAGEC3Q8TD91 643 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 NUDT8Q8WV74 236 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 NANOS1Q8WY41 292 aaKnown RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PRAP1Q96NZ9 151 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PANX3Q96QZ0 392 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 SLC6A16Q9GZN6 736 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 PNPLA3Q9NST1 481 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 UTP6Q9NYH9 597 aaKnown RBP10.91□□□□□ -0.66
SDCBP-211ENST00000523441 SPATA7Q9P0W8 599 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 L3MBTL1Q9Y468 752 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
SDCBP-211ENST00000523441 RTTNQ86VV8 2226 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 FEZF1A0PJY2 475 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ARHGEF33A8MVX0 844 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 G3V3Y1 287 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 KLRC4-KLRK1H3BQV0 150 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 SMAPO00193 183 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 TXNDC9O14530 226 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 CD3EAPO15446 510 aaKnown RBP10.9□□□□□ -0.66
SDCBP-211ENST00000523441 NIPSNAP2O75323 286 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 NDUFS3O75489 264 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 CCNDBP1O95273 360 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 EZRP15311 586 aaKnown RBP10.9□□□□□ -0.66
SDCBP-211ENST00000523441 FOSL1P15407 271 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 FMO4P31512 558 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 KIR2DL3P43628 341 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 PNLIPRP1P54315 467 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 CDH17Q12864 832 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ANKRD20A4Q4UJ75 823 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF425Q6IV72 752 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ARSKQ6UWY0 536 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ACAD11Q709F0 780 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 PRIMA1Q86XR5 153 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 LIX1LQ8IVB5 337 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ARHGEF39Q8N4T4 335 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 SLCO2A1Q92959 643 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.66
SDCBP-211ENST00000523441 PKP4Q99569 1192 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 ABHD10Q9NUJ1 306 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 KLF13Q9Y2Y9 288 aaPredicted RBP10.9□□□□□ -0.66
SDCBP-211ENST00000523441 NAALAD2Q9Y3Q0 740 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
SDCBP-211ENST00000523441 JMJD1CQ15652 2540 aa10.9□□□□□ -0.67
SDCBP-211ENST00000523441 GOLGA8KD6RF30 607 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 E7EVH7 732 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 H0YIG0 161 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 GOLGA8TH3BQL2 631 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 PHF2O75151 1096 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 NSA2O95478 260 aaKnown RBP10.89□□□□□ -0.67
SDCBP-211ENST00000523441 MBD3O95983 291 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 B3GALT4O96024 378 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 INHBBP09529 407 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 BCL6P41182 706 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 MAGEA1P43355 309 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 NAP1L1P55209 391 aaKnown RBP10.89□□□□□ -0.67
SDCBP-211ENST00000523441 RHAGQ02094 409 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 PRDX1Q06830 199 aaKnown RBP10.89□□□□□ -0.67
SDCBP-211ENST00000523441 KEAP1Q14145 624 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 FAM53BQ14153 422 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 GXYLT1Q4G148 440 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 ACSBG2Q5FVE4 666 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 AARS2Q5JTZ9 985 aaKnown RBP10.89□□□□□ -0.67
SDCBP-211ENST00000523441 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 ARHGAP11AQ6P4F7 1023 aa10.89□□□□□ -0.67
SDCBP-211ENST00000523441 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms