RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TAF2Q6P1X5 1199 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 POTEGQ6S5H5 508 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 NXPE4Q6UWF7 544 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 PLD6Q8N2A8 252 aaKnown RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 C4orf32Q8N8J7 132 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 SYT14Q8NB59 555 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 FAM156AQ8NDB6 213 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 BVESQ8NE79 360 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 UBA3Q8TBC4 463 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 PCNPQ8WW12 178 aaKnown RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 CELF6Q96J87 481 aaKnown RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 NPAS2Q99743 824 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 CMSS1Q9BQ75 279 aaKnown RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 ZNF559Q9BR84 538 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 SH2D3AQ9BRG2 576 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 SYT11Q9BT88 431 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 DPCDQ9BVM2 203 aaPredicted RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 C1QTNF6Q9BXI9 259 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 NKX6-2Q9C056 277 aaPredicted RBP8.04□□□□□ -1.12
HMGB4-204ENST00000522796 PCDHAC1Q9H158 963 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 KLHL31Q9H511 634 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 ASB8Q9H765 288 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 IL1RAPQ9NPH3 570 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 KLHL11Q9NVR0 708 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 TBC1D29Q9UFV1 150 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 PCDHA10Q9Y5I2 948 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 CHD5Q8TDI0 1954 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 CNTNAP4Q9C0A0 1308 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 TAF1LQ8IZX4 1826 aa8.04□□□□□ -1.12
HMGB4-204ENST00000522796 SMLR1H3BR10 107 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 H7BY64 318 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 HCN1O60741 890 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 NXPH2O95156 264 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 GSRP00390 522 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SOX8P57073 446 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 POU4F1Q01851 419 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TROAPQ12815 778 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 AMHR2Q16671 573 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ATP13A5Q4VNC0 1218 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 YOD1Q5VVQ6 348 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 FRMPD2BQ6IN97 320 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 RGS7BPQ6MZT1 257 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 RPL13AP3Q6NVV1 102 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 KLHL24Q6TFL4 600 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 PGAP1Q75T13 922 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ZNF561Q8N587 486 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MS4A15Q8N5U1 240 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MYCT1Q8N699 235 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 CANT1Q8WVQ1 401 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MBOAT7Q96N66 472 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SLC30A2Q9BRI3 323 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SEMA4CQ9C0C4 833 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 PRDM7Q9NQW5 492 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TBC1D13Q9NVG8 400 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 C14orf105Q9NVL8 296 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ADA2Q9NZK5 511 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 CA5BQ9Y2D0 317 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 KIF1BO60333 1816 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 OR2AT4A6NND4 320 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 C22orf46C9J442 243 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 M0QZ92 97 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 PIK3R2O00459 728 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 NRP1O14786 923 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ZFPL1O95159 310 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 INHBAP08476 426 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 RNH1P13489 461 aaKnown RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 HLA-DPA1P20036 260 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 PTGFRP43088 359 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SCN1BQ07699 218 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SLC10A2Q12908 348 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TATDN3Q17R31 274 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ARHGAP40Q5TG30 622 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MAP1SQ66K74 1059 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MBLAC2Q68D91 279 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ARHGAP17Q68EM7 881 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 EPGNQ6UW88 154 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 USP30Q70CQ3 517 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 CHMP1BQ7LBR1 199 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TMCO2Q7Z6W1 182 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 TRIM69Q86WT6 500 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 OR2L3Q8NG85 312 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 BPIFB1Q8TDL5 484 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ZNF385AQ96PM9 386 aaKnown RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 HBEGFQ99075 208 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 CDCA3Q99618 268 aaPredicted RBP8.03□□□□□ -1.12
HMGB4-204ENST00000522796 SMOQ99835 787 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 RNF32Q9H0A6 362 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 EVA1AQ9H8M9 152 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 MKNK2Q9HBH9 465 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 GKN1Q9NS71 199 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 ERVK13-1Q9NX77 482 aa8.03□□□□□ -1.12
HMGB4-204ENST00000522796 USE1Q9NZ43 259 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms