RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 OR1D5P58170 312 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 PPP1CAP62136 330 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 ERVK-8P63133 956 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 DAB2P98082 770 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
CPNE3-205ENST00000522240 RBBP5Q15291 538 aaKnown RBP12.51□□□□□ -0.41
CPNE3-205ENST00000522240 ATP6AP1LQ52LC2 224 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 FCRL6Q6DN72 434 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 WDR74Q6RFH5 385 aaPredicted RBP12.51□□□□□ -0.41
CPNE3-205ENST00000522240 SCIMPQ6UWF3 145 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 CHSY3Q70JA7 882 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 SPATA19Q7Z5L4 167 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 ZFAND4Q86XD8 727 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 PLXDC1Q8IUK5 500 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 FAM20CQ8IXL6 584 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 C19orf47Q8N9M1 422 aaKnown RBP12.51□□□□□ -0.41
CPNE3-205ENST00000522240 ANKRD53Q8N9V6 530 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 MFSD9Q8NBP5 474 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 HBEGFQ99075 208 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 DPYSL5Q9BPU6 564 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 CHRNA10Q9GZZ6 450 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 NMRK1Q9NWW6 199 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 TMED5Q9Y3A6 229 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 AP1M2Q9Y6Q5 423 aa12.51□□□□□ -0.41
CPNE3-205ENST00000522240 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 FEZF1A0PJY2 475 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 E9PBE3 544 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 CAPN5O15484 640 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 B4GAT1O43505 415 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 OR1F1O43749 312 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 KLHL41O60662 606 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 SEMA3DO95025 777 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 PCSK2P16519 638 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 CSF2RBP32927 897 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 BCL6P41182 706 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 MRPL19P49406 292 aaKnown RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 NEK2P51955 445 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 RPS13P62277 151 aaKnown RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 DDX39BQ13838 428 aaKnown RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 SGO1Q5FBB7 561 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 C6orf136Q5SQH8 315 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 PERM1Q5SV97 790 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 FAM91A1Q658Y4 838 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 TRPV3Q8NET8 790 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 IFI44Q8TCB0 444 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 NCSTNQ92542 709 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 CMTM7Q96FZ5 175 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 TRAPPC9Q96Q05 1148 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 LRRC37BQ96QE4 947 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 MTERF1Q99551 399 aaKnown RBP12.5□□□□□ -0.41
CPNE3-205ENST00000522240 SERPINI1Q99574 410 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 ZFYVE21Q9BQ24 234 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 CCDC3Q9BQI4 270 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 MS4A8Q9BY19 250 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 ZNF385DQ9H6B1 395 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 SEMA5BQ9P283 1151 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 VPS29Q9UBQ0 182 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 ZFP69BQ9UJL9 534 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 BTBD3Q9Y2F9 522 aa12.5□□□□□ -0.41
CPNE3-205ENST00000522240 KMT2BQ9UMN6 2715 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CPED1A4D0V7 1026 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 FCHO1O14526 889 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 UBDO15205 165 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SLC22A2O15244 555 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 TOX3O15405 576 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 NRP2O60462 931 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 GP1BAP07359 652 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 MYF5P13349 255 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CD59P13987 128 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 PVRP15151 417 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CKMT2P17540 419 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CD1CP29017 333 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 ADSLP30566 484 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 ARFIP1P53367 373 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 GFERP55789 205 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 HMGCS1Q01581 520 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 EMX2Q04743 252 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CUL3Q13618 768 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 GSTA3Q16772 222 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms