RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PRSS38A1L453 326 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 PDZK1P1A8MUH7 402 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CXCR6O00574 342 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CKMT2P17540 419 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 PSMB5P28074 263 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 RAB28P51157 221 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 TPMTP51580 245 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CCR8P51685 355 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CCINQ13939 588 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 PDK3Q15120 406 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 UAP1L1Q3KQV9 507 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CLECL1Q8IZS7 167 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 C10orf111Q8N326 155 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 MARVELD2Q8N4S9 558 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 VPS37AQ8NEZ2 397 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 OR52E4Q8NGH9 312 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 WDR48Q8TAF3 677 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 SNX19Q92543 992 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 COQ8BQ96D53 544 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 RNF145Q96MT1 663 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 OR2M4Q96R27 311 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 SLC29A1Q99808 456 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CHID1Q9BWS9 393 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 RAB11FIP5Q9BXF6 653 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 RHBGQ9H310 441 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 BTNL2Q9UIR0 455 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 MMP17Q9ULZ9 603 aa17.74■□□□□ 0.43
TRAPPC9-210ENST00000521667 EVPLLA8MZ36 301 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 YY2O15391 372 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 CCT8P50990 548 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 KRT33BQ14525 404 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 ATP6AP1Q15904 470 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 ANXA8L1Q5VT79 327 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 PPP4R4Q6NUP7 873 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 FAM3CQ92520 227 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 REXO5Q96IC2 774 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 CDX2Q99626 313 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 MVB12BQ9H7P6 319 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 ATP6V1HQ9UI12 483 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 EXO1Q9UQ84 846 aaKnown RBP17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 F5P12259 2224 aa17.73■□□□□ 0.43
TRAPPC9-210ENST00000521667 ANKDD1BA6NHY2 528 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SAC3D1A6NKF1 404 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SHISA7A6NL88 538 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 OR52A4PA6NMU1 304 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 NARSO43776 548 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 EPN2O95208 641 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 CPSF4O95639 269 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 GBAP04062 536 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 PKLRP30613 574 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 REEP5Q00765 189 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 NFATC4Q14934 902 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 FAM98BQ52LJ0 330 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 INTS11Q5TA45 600 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 ZNF621Q6ZSS3 439 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 OR4K1Q8NGD4 311 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 FAM162AQ96A26 154 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 PITHD1Q9GZP4 211 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 XKR8Q9H6D3 395 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 REEP4Q9H6H4 257 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 PRDM8Q9NQV8 689 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 DOCK9Q9BZ29 2069 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 C7orf72A4D263 438 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 LRRC72A6NJI9 287 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 H7BY64 318 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 CLIC1O00299 241 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SCAMP1O15126 338 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 RAP2AP10114 183 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 GABRG2P18507 467 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 HNRNPA2B1P22626 353 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SERPINB1P30740 379 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SLC14A1Q13336 389 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 C6orf52Q5T4I8 152 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 ENPP7Q6UWV6 458 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SERPINA11Q86U17 422 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 EPHX4Q8IUS5 362 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 PACRGLQ8N7B6 248 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 ANKRD53Q8N9V6 530 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 OR2L8Q8NGY9 312 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 C16orf78Q8WTQ4 265 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 MSANTD3Q96H12 275 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 PRAP1Q96NZ9 151 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 UGT2B28Q9BY64 529 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SH3BP4Q9P0V3 963 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 DLGAP2Q9P1A6 1054 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 ERVK-11Q9UQG0 969 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 CA5BQ9Y2D0 317 aa17.72■□□□□ 0.43
TRAPPC9-210ENST00000521667 SOCS2O14508 198 aa17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 SMNDC1O75940 238 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 LDLRP01130 860 aa17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 KLK1P06870 262 aa17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 RETP07949 1114 aa17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 ENGP17813 658 aa17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 RPL3P39023 403 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-210ENST00000521667 CHRNB3Q05901 458 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms