RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TGDSO95455 350 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 IGSF6O95976 241 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PEX11BO96011 259 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PROCP04070 461 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ALDOAP04075 364 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CBSLP0DN79 551 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PVRP15151 417 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ZNF30P17039 623 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 RHOQP17081 205 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ALDH3A1P30838 453 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CHRNB4P30926 498 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ADRA1AP35348 466 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CBSP35520 551 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 SOX11P35716 441 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ETV3P41162 512 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 MAGEA12P43365 314 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ARFIP2P53365 341 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 GEMP55040 296 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ARG2P78540 354 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 HSD11B2P80365 405 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 HSF1Q00613 529 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 OCRLQ01968 901 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CACNG1Q06432 222 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 RAD51Q06609 339 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 BST1Q10588 318 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CDH17Q12864 832 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PLCL1Q15111 1095 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PTPRRQ15256 657 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CNGA3Q16281 694 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CYP2A13Q16696 494 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 MLIPQ5VWP3 458 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 BRAT1Q6PJG6 821 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 KDELC1Q6UW63 502 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 LYPD4Q6UWN0 246 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ASRGL1Q7L266 308 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CHST15Q7LFX5 561 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 STRA8Q7Z7C7 330 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 GALNT13Q8IUC8 556 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PLD6Q8N2A8 252 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 Q8N3U1 123 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 RPRMLQ8N4K4 120 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 KIF2BQ8N4N8 673 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 GBP7Q8N8V2 638 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ACVR1CQ8NER5 493 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 OR8K5Q8NH50 307 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ROBO4Q8WZ75 1007 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 HAS2Q92819 552 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PTERQ96BW5 349 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ECHDC3Q96DC8 303 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ERP27Q96DN0 273 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 DTD2Q96FN9 168 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 THOC3Q96J01 351 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 LCORQ96JN0 433 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ZNF778Q96MU6 729 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CDK15Q96Q40 435 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 RBBP8Q99708 897 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 MCMBPQ9BTE3 642 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 KIFC1Q9BW19 673 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 TMEM120AQ9BXJ8 343 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 C20orf27Q9GZN8 174 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 TSPAN10Q9H1Z9 355 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC24A3Q9HC58 644 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CHRAC1Q9NRG0 131 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 TMEM216Q9P0N5 145 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 HEY2Q9UBP5 337 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PADI2Q9Y2J8 665 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 MTO1Q9Y2Z2 717 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 A0A1W2PPR1 153 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 GOLGA8TH3BQL2 631 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 J3KR12 359 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ARHGEF9O43307 516 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 KDELR3O43731 214 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ITM2AO43736 263 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 MGRN1O60291 552 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 GLRA3O75311 464 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SNNO75324 88 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 PMPCBO75439 489 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 KRT16P08779 473 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ACP5P13686 325 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 TYK2P29597 1187 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SPRP35270 261 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 FOLR3P41439 243 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 RGRP47804 291 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 CTSCP53634 463 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 CSE1LP55060 971 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 TMPRSS15P98073 1019 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 STX3Q13277 289 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 GPR18Q14330 331 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 IHHQ14623 411 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 INSCQ1MX18 579 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 FASTKD1Q53R41 847 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 HSP90AA5PQ58FG0 334 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 PCID2Q5JVF3 399 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 C10orf62Q5T681 223 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 AGAP9Q5VTM2 703 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ATG16L1Q676U5 607 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 RAET1GQ6H3X3 334 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms