RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 MANBAO00462 879 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 NDUFS4O43181 175 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 NRP2O60462 931 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ULK1O75385 1050 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 CLEC3AO75596 197 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 FGF4P08620 206 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.25
SDC2-203ENST00000519587 HSD3B1P14060 373 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 HSD3B2P26439 372 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ARRB2P32121 409 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 PWP1Q13610 501 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 DDX39BQ13838 428 aaKnown RBP13.52□□□□□ -0.25
SDC2-203ENST00000519587 KCNAB1Q14722 419 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 CES4AQ5XG92 561 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ASPGQ86U10 573 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.25
SDC2-203ENST00000519587 PLD3Q8IV08 490 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 CSNK1A1LQ8N752 337 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 CAMKVQ8NCB2 501 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 SELENOMQ8WWX9 145 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 SORT1Q99523 831 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 CCT7Q99832 543 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 SPNS1Q9H2V7 528 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 RHBGQ9H310 441 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 FAM60AQ9NP50 221 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 FGF21Q9NSA1 209 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 NMRK1Q9NWW6 199 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ZNF225Q9UK10 706 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 ZZEF1O43149 2961 aa13.52□□□□□ -0.25
SDC2-203ENST00000519587 A0A1B0GTL3 188 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 URADA6NGE7 173 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 B4E171 279 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 H0YGG7 62 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 FOXE1O00358 373 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 PRAMEF10O60809 474 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 OR2B3O76000 313 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SERPIND1P05546 499 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SERPINA6P08185 405 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 JMJD7P0C870 316 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 TSPAN7P41732 249 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 ITGA1P56199 1179 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 VSX2P58304 361 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 RAB15P59190 212 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 STXBP1P61764 594 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 SKP1P63208 163 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 CYP4F2P78329 520 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 FOXM1Q08050 763 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 TGM3Q08188 693 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 IL11RAQ14626 422 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 C16orf72Q14CZ0 275 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 GPR19Q15760 415 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 RNF165Q6ZSG1 346 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 RAB11FIP2Q7L804 512 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 WDR75Q8IWA0 830 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 DDIASQ8IXT1 998 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 ZNF781Q8N8C0 355 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 TTC29Q8NA56 475 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 HUS1BQ8NHY5 278 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 PIWIL2Q8TC59 973 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 TWIST2Q8WVJ9 160 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SLC13A3Q8WWT9 602 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 CMTM7Q96FZ5 175 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 OR2A5Q96R48 311 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 KCNA7Q96RP8 456 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 BRF2Q9HAW0 419 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 DMRT3Q9NQL9 472 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SIDT1Q9NXL6 827 aaKnown RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 VTI1BQ9UEU0 232 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 RARRES3Q9UL19 164 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 ZNF490Q9ULM2 529 aaPredicted RBP13.51□□□□□ -0.25
SDC2-203ENST00000519587 PPT2Q9UMR5 302 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 LOXL2Q9Y4K0 774 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 SPEGQ15772 3267 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 PTPRBP23467 1997 aa13.51□□□□□ -0.25
SDC2-203ENST00000519587 TRPC5OSA6NMA1 111 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 TMEM233B4DJY2 109 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 PLD2O14939 933 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ZSCAN9O15535 394 aaPredicted RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 EIF2S1P05198 315 aaKnown RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 TROVE2P10155 538 aaKnown RBP eCLIP13.5□□□□□ -0.25
SDC2-203ENST00000519587 FOLR1P15328 257 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 GABRA4P48169 554 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 FOXA1P55317 472 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 GRM7Q14831 915 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 IMPG1Q17R60 797 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms